Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05909 ATGGCGCGAAGATCTCCTCGTCTGGTAAACCAAAAATGCGAAACAGGTTGCACATCCCGAATGTTTGGAATCTTTAACTTTCATGAAGCTCGTTCTGATAGAAGATTGGTTTCCAATGGTAGCCATTTGAATAAACACACCACTGGTCAGACTGCAGGAAATGGAAAATCCAAAATTAACTCGGATGTGCTTAGCACGGTCGATGAAAAGTACCCTCATGCTGCTGATGCAAGTTCGAGAAGAAAAAGAGGTTTAAGTTGTAAGAATATCTGCGTGGAGGATAATCAGATTGCAGATTTGGAAAAGGAAGTAACGAAAATGATTGTTAATCAAAGATTTTTTGACAAAAACTCTCGAGGCAAAGACGGTGTAGACTGTCAGCCTAATCAGTTCTTAGATGCTGTACAGATTTTATATTCAAACAAGGAACTTTTTGTTAAGCTTCTGCAAGATCCAAACTCTCTGTTGGTGAAACAGATTCATGACTTACAGAAATCTCAAGTGAAAGCGGAACAAAATGGAATGACTAGATTGAATAAAGCTCAAAACAGTGGCAGTTTTGTTGATAGGTCTAAATCGAGTTCAGATTGCGAGACTCAGTCCTCTAAAAGAATAGTAGTTTTGAAGCCTAAGATGAGTAATGTGAAAGAAATTGCTGACAGTAGATATGTGCTTATGAGTGGATCACTAGTACAAGCTATACATGATCAATTTGAAGAGAACCATCTTGCAGACATTGCAACATTCTCTTTGGATCCAATGAACAAATCAAATGACATCATAAGTGAAGTTCTGCAGGCTTTCAGCTTGAAATGCGATGAACCGATAAAGAGTTATTTATCAAACCTTTTGACGGATTCATCCACTTTTGAAGAACTGAATGGATTAACTGACCAACTTTCTGACAGTAAAATCTTGCATGACTGTATCATCCAATGTTTCATGGACTTATACCAGAGCAGTGGTTTTCTACCTCAATTTTCATCAAGAAATTCAAACTTCTTCCAACCATGTGTTGTGAAGAAAATTTTGGTTAGAGAAATTAATGAACTTGTTAACCTGCACTTTGCTCCTCGTCAATCACCAATAACGTTACAGCAGGTTGTTGAAAAGGACTTAGGAAGACGTGGATCATGGATGAATATCCATGTGGATACAGAAGACATTGCAATTGAAGTGGAGGAAGATGTTTTGGAAAAACTGGTTTTGGAAATAGTCTCTGATATGGATATCAGAGACTTGATACAATGCAATGAAACTATGTCAAAATCATAA 1275 0.3733 MARRSPRLVNQKCETGCTSRMFGIFNFHEARSDRRLVSNGSHLNKHTTGQTAGNGKSKINSDVLSTVDEKYPHAADASSRRKRGLSCKNICVEDNQIADLEKEVTKMIVNQRFFDKNSRGKDGVDCQPNQFLDAVQILYSNKELFVKLLQDPNSLLVKQIHDLQKSQVKAEQNGMTRLNKAQNSGSFVDRSKSSSDCETQSSKRIVVLKPKMSNVKEIADSRYVLMSGSLVQAIHDQFEENHLADIATFSLDPMNKSNDIISEVLQAFSLKCDEPIKSYLSNLLTDSSTFEELNGLTDQLSDSKILHDCIIQCFMDLYQSSGFLPQFSSRNSNFFQPCVVKKILVREINELVNLHFAPRQSPITLQQVVEKDLGRRGSWMNIHVDTEDIAIEVEEDVLEKLVLEIVSDMDIRDLIQCNETMSKS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05909 424 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 94 - -
Vivi5g05909 424 MobiDBLite consensus disorder prediction 41 59 - -
Vivi5g05909 424 Pfam Protein of unknown function (DUF3741) 111 154 IPR022212 -
Vivi5g05909 424 Pfam Domain of unknown function (DUF4378) 261 404 IPR025486 -
Vivi5g05909 424 MobiDBLite consensus disorder prediction 39 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05909 Vivi-Chr5 163307999 163310321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05909 259 416 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 31.250 1.12e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05909 - - vvo:131608058 830.091