Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05904 ATGCAGTGGGAACCGGAGGGAGGTGGAAAAGTTGCCGGACTTGCAGGTGGCCGGCTTGTGTCTTTGATTAAGTGGATAAATGCGGAGCTTCCTGACTTTAATCTGCCTTTGGAAACGTCGGAAGAGGAATTGAGGGCATTCTTGAGTGATGGATTGGTATTATGCAGCATTTTGGATAAGCTGGTTCCTGGTTCACTCCAGGGAAGTGGTTCTTTGAATGAGCCGATGGATGTTGAAAGGTTTTTGGTGGCCTTGGATGAATTGGGATTGCCAGGATTTGAATTGTCGGACCTGGAGCAGGGATCGATGGTGCCCGTGTTGCAGTGCCTTGAGAATCTGAAAGCTCACTTTGTATATAATGCTGCACACGAAAATGTCCAAAGTTATTCTAGAAAGAGATGGGACCAGCCAGACCTAACATCCCTAGCCGAAACTGATAGTTGCCTCAAGGATGCTTCAAATTTCCAACATGCTGTTGATGGTTCTGTTGTATCAGATGGAGTTGCTTCCATTGATCATATTGGATTCAAGTCTAATGAACTGTTGCAATTGAAACAAGGACTGCCCGTGGATCTTTCAGATGCTAAACTGAATGAATTATTAAAATCAAACAATTTGGACAGTGTCTCAACTCGATGTCTTTTTAACATACTAAATAGGATCCTAAGTGATATCTTTGGAAGGAAGAATGGAGATATACCTCAAGCTCAGCGTGCAGCGTGCCTGTTGAGAAAAATTCTGCAAGTAATTGAGTTACGCTTTTCAAATCAAGCAGAAAGCATGAAAAATCAAAACAATATTTTCAAAGCTCGTGAGGGAAAGTATCAAACAAAACTCAATGCAGTTGAAACCTTGGCGGTAGGGACAACTGAAGAGAATGAGCTTGTGACAGGTTGGGTTCAGAAGTTGAAGTTTTCTTTGCAGCTTGAACAAACTAAATTTGAGGAAAAGAAGAAACTTGAAGATCGGGATTTTTCCCAATTAAAGAAAGACAAAGTTCGCAGTGATATTGAAATTGCTGCATTGAAGCAAGATTTGGAAATGGCAAAAAGATCACATGAAGAACATGTTTTGCAGTTAGAATTGCAAGCTTCTCAATCTAAAGCTGAATATGAGAAAAGGATACAAGAACTTAAATTTCATCTTGCTGATGCGAGAAAGCAAGTGAAGGAACTGGAGGCATTTTCGGAATCCAGATATTTGAATTGGAAGAATAAAGAGCATACCTATCAAAGTTTTTTAAATCAACAATTTGGAGCTTTCAAGGAATTGAAAGCTGTCATGAAATCTGTCAAAGATGAAGTGATAAAAACAAAAAGAAGCTACTTAGAGGAATACAAGTACTTTGGAATCAAGCTCAAAGGTCTAGCCGAGGCTGCTGATAATTATCATGTTCTTCTAACAGAAAATAGGAAATTATATAATGAAGTTCAAGATTTGAAAGGAAATATCAGGGTATATTGTCGAATTAGACCATTTCTTTCTGGGCAAAGTCAGAAACATACAACAGTCGAGTTTATTGGTGAAGACGGAGAACTAATTATTAGCAATCCTCTTAAACAAGGAAAAGAAAGCCGCAAGCTTTTTAAATTTAATAAAGTTTTTGGTCAAGCAGCGTGTCAAGAGGAAGTATTCTTGGACACTCGACCACTAATCCGTTCTGTTCTTGATGGGTTCAATGTTTGTATATTTGCTTACGGTCAAACTGGCTCAGGAAAGACTTATACCATGAGTGGACCTAACCTATCATCAAAATCGGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGAGTAGGGAAAATTCAATTGTTTATGAAATTGGAGTTCAAATGGTTGAAATTTATAATGAACAAGTTCGTGATTTACTATCAAGCAGTGGTCCTCAGAGGAGTGGTCCTCAGAAGAGACTTGGGATTTGGAATACTACCCTACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTGAAATCTATGAAAGATGTCCTTGAGTTGATGAACACTGGGTTGATGAATCGGGCAACTAGTGCTACAGCCCTAAACGAAAGAAGTAGTAGATCACACAGTGTTCTCTCCATTCATGTTCGAGGAACGGAAGTGAAGACCAACACTCTGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCGGGAAGTGAAAGAGTGGATCGTTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAGCATATAAATAAATCACTTTCTGCACTTGGAGATGTAATATATGCTCTGTCTCAAAAGAGCTCACATGTGCCATATAGAAATAGCAAATTGACTCAACTCCTTCAGAGTTCGTTAGGCGGTCAAGCAAAAACCCTTATGTTTGTACAGCTTAATCCGGATGTTGCTTCATACTCTGAAACTATTAGCACTTTGAAGTTTGCTGAAAGAGTTTCTGGTGTTGAGTTAGGCGCAGCTCGAAGCAACAAAGAGGGAAGGGATATGAGAGAACTAATGGAACAGATGACATCTCTCAAGGACGCTATGGCAAGGAAGGATGAAGAGATTGAGCGGTTGCAGTTGCTCAAGCCTAATCATAATGGTGCCAAACTTGGAATGATCTCCCCAAGACACATGCCATCATCCCCAAGGAGACATTCTATAGGGACTCCCCGCAACAGCACGAGACTTTCTGGCACAAGGATCTCGGGGGTCAATGAAAAAACAGCTTTTGACATGGATAACGGCTCAGAGTACAGTGATAAGCATTCTGAAGCTGGTTCTCATCAATCAATTGATGAGTTCAGGAACAAGCCCAGTTCCCTTCGGTTGAAATTAGCTCAAGAAGACGCTGAACAAAATTTCAATGAGGATATTGAACTCTTAAGATTCGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGACGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGACCTTGATAAGGCAGCTGAAACTACACCAGCTAAGGATATTACATCCAACAAACTTCCATCTCAGAGTGTGGAAAAGTCCAATATGCCATCAAGAATTCCCAAAGCTCCGCAAATCCAACCAAAACCGCCGTCAAAAACTTCTAGGCTATCATTGAACAAAAGCACTTCAAAGGTTTCGTCAAGTATTACAAAACCGACAGCCGGTAGCTCTTCGGCAGCTTCGGCAAGGTCCTCTAAACGATGGCAATAG 3240 0.4099 MQWEPEGGGKVAGLAGGRLVSLIKWINAELPDFNLPLETSEEELRAFLSDGLVLCSILDKLVPGSLQGSGSLNEPMDVERFLVALDELGLPGFELSDLEQGSMVPVLQCLENLKAHFVYNAAHENVQSYSRKRWDQPDLTSLAETDSCLKDASNFQHAVDGSVVSDGVASIDHIGFKSNELLQLKQGLPVDLSDAKLNELLKSNNLDSVSTRCLFNILNRILSDIFGRKNGDIPQAQRAACLLRKILQVIELRFSNQAESMKNQNNIFKAREGKYQTKLNAVETLAVGTTEENELVTGWVQKLKFSLQLEQTKFEEKKKLEDRDFSQLKKDKVRSDIEIAALKQDLEMAKRSHEEHVLQLELQASQSKAEYEKRIQELKFHLADARKQVKELEAFSESRYLNWKNKEHTYQSFLNQQFGAFKELKAVMKSVKDEVIKTKRSYLEEYKYFGIKLKGLAEAADNYHVLLTENRKLYNEVQDLKGNIRVYCRIRPFLSGQSQKHTTVEFIGEDGELIISNPLKQGKESRKLFKFNKVFGQAACQEEVFLDTRPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNLSSKSDWGVNYRALHDLFHISQSRENSIVYEIGVQMVEIYNEQVRDLLSSSGPQRSGPQKRLGIWNTTLPNGLAVPDASMHSVKSMKDVLELMNTGLMNRATSATALNERSSRSHSVLSIHVRGTEVKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIYALSQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDMRELMEQMTSLKDAMARKDEEIERLQLLKPNHNGAKLGMISPRHMPSSPRRHSIGTPRNSTRLSGTRISGVNEKTAFDMDNGSEYSDKHSEAGSHQSIDEFRNKPSSLRLKLAQEDAEQNFNEDIELLRFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPDLDKAAETTPAKDITSNKLPSQSVEKSNMPSRIPKAPQIQPKPPSKTSRLSLNKSTSKVSSSITKPTAGSSSAASARSSKRWQ 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05904 1079 PRINTS Kinesin heavy chain signature 558 579 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g05904 1079 PRINTS Kinesin heavy chain signature 686 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g05904 1079 PRINTS Kinesin heavy chain signature 766 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g05904 1079 PRINTS Kinesin heavy chain signature 717 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g05904 1079 PANTHER KINESIN-LIKE PROTEIN KLP-3 312 1041 IPR027640 GO:0003777|GO:0007018
Vivi5g05904 1079 MobiDBLite consensus disorder prediction 1006 1025 - -
Vivi5g05904 1079 SMART kinesin_4 481 824 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g05904 1079 Pfam Calponin homology (CH) domain 22 117 IPR001715 GO:0005515
Vivi5g05904 1079 MobiDBLite consensus disorder prediction 881 900 - -
Vivi5g05904 1079 Gene3D - 19 118 IPR036872 -
Vivi5g05904 1079 Gene3D Kinesin motor domain 424 818 IPR036961 -
Vivi5g05904 1079 SMART ch_5 18 116 IPR001715 GO:0005515
Vivi5g05904 1079 Coils Coil 368 395 - -
Vivi5g05904 1079 Pfam Kinesin motor domain 489 814 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g05904 1079 MobiDBLite consensus disorder prediction 909 931 - -
Vivi5g05904 1079 Coils Coil 830 857 - -
Vivi5g05904 1079 MobiDBLite consensus disorder prediction 862 931 - -
Vivi5g05904 1079 MobiDBLite consensus disorder prediction 1038 1079 - -
Vivi5g05904 1079 MobiDBLite consensus disorder prediction 1005 1079 - -
Vivi5g05904 1079 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 425 818 - -
Vivi5g05904 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 854 IPR027417 -
Vivi5g05904 1079 ProSiteProfiles Calponin homology (CH) domain profile. 16 118 IPR001715 GO:0005515
Vivi5g05904 1079 ProSiteProfiles Kinesin motor domain profile. 483 816 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g05904 1079 Coils Coil 339 363 - -
Vivi5g05904 1079 SUPERFAMILY Calponin-homology domain, CH-domain 21 117 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05904 Vivi-Chr5 163231424 163239007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05904 451 850 Calmodulin-binding Proteins AT5G65930 38.971 1.42e-71 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05904 K10406 - gmx:100777089 1657.11