Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi5g05903 | ATGTCTGGATGCAATAAATCGCCTAAAAATGTTCAACATTCCGTCAAGTATTGGTCGATTCAAGACGGAGTGATATCCTCTAAGGTTGATCCTTCTCGTGTAGATTGTTCGCCGTCTCTTTCCTATAATGAGAATAAGCAATGCTGTAAATATTCTCGAATGAAGTCCCCTGAGATACTGACAACACCTCAGCTCATTTCTGCAATTCGCCACTTATGGGATTCTGCTAGTCGGCCGCTGTCTTTTTTACTCCCGAAGGAAAATGTGAACCGAGATTATGACGACAAAGGATTCTCAAAAGATGAAATTATCAGTTGCGTTCATAAAAGAAATGGTGTGGTTAATTCAGATACAACTAATTATTATTCGGTTAATCCGGGCGCTACTCGCTTCGGTTCACAAATTTTGCAGGAAAAATTGGATTTCCCTACGGTAACACAGAAGATGTTGATGCTTAAATCTTCTTATGGAAACCGAGATTATATTCATTCTTTATTCCAGAGAGTTGTGCAGGCACATGATAAAAATTCAAATGAATATTGTAATGAAAAGGAACTTGGGAGTAAAGATACTGAGCCGGAGAACCTGGAAAATAGTTCTTTGGTTGCGAGGGATTGCATTTCAATAGACACGAGTACCACTTCGTTGGTTAAGGAAAGCGATGTGTGTGATCCTGTTGTACTAATACATGAAGCTTCATCATTATCTAATGATGAAGTTCCTATGACAAAAGAAGTTAACCCACTTTGTTCAGACTATTTTCTTCAAGCTGTACCTGATAATCGGATGGAAGATGATGCTTGTCGGACCCTATCTTCTAGTATATATGCAGATTATCATATTAACGGCTCTTTAGCTACCTCTAACAGTGCTTCTGTGCAGTGCCAATATAAGATTGATGATAATGAATTAATGGAAATTCAAAGAAGAAATTTATTAGATATAAGTGATAATGAACGAAAGGTTCAGATTTTCTCTGCGAATCATAAGCAGGCTTCCCATTTCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCGATGGCTGGAGTGTGTGTCAGCTGTTGTCTGCATCCGGTTGACACAATCAAGACAGTCATTCAATCATGTCGTGCAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTTCCTGGACTATATCGTGGAATTACTACAAACATTGCTTGTTCAGCTCCAATTTCTGCAGTTTACACTTTCACTTATGAATCAGTTAAAGCAGTTTTGCTTCCTTATCTGCCAAAGGAGTATTATTCCTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCTACATCTTTCATCTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAATTGGATCTCATTATCGCAACTGCTGGGATGCATTGGTTGGAATTATCAGAAATGGTGGTCTTTACTCGCTATATGCGGGTTGGAAAGCTGTATTGTGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCCTGAAGCAAGTGATGCCATCTTCTAGTATTCAATCCCACACACTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCGTTTGATGTCATCAAGACAAGATTACAGACACAGATTCCGGGATCAAGAAATCAATATGATAGTGTGTTTCACGCCCTTTACAAAATTAGCAAGACGGAAGGTTTGAAGGGCTTGTACAGGGGGTTGACACCGAGGCTGATTATGTACATGTCTCAAGGATCATTGTTCTTTGCTTCATATGAATTTTTCAAAAGTGTATTTTCTCTGGAATCACCACTTCCCACTGGTTTATAA | 1860 | 0.3935 | MSGCNKSPKNVQHSVKYWSIQDGVISSKVDPSRVDCSPSLSYNENKQCCKYSRMKSPEILTTPQLISAIRHLWDSASRPLSFLLPKENVNRDYDDKGFSKDEIISCVHKRNGVVNSDTTNYYSVNPGATRFGSQILQEKLDFPTVTQKMLMLKSSYGNRDYIHSLFQRVVQAHDKNSNEYCNEKELGSKDTEPENLENSSLVARDCISIDTSTTSLVKESDVCDPVVLIHEASSLSNDEVPMTKEVNPLCSDYFLQAVPDNRMEDDACRTLSSSIYADYHINGSLATSNSASVQCQYKIDDNELMEIQRRNLLDISDNERKVQIFSANHKQASHFLAKQEHAFSGAMAGVCVSCCLHPVDTIKTVIQSCRAEQRSIFYIGKSIVSDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAVLLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQIGSHYRNCWDALVGIIRNGGLYSLYAGWKAVLCRNIPHSMIKFYTYESLKQVMPSSSIQSHTLQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSRNQYDSVFHALYKISKTEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKSVFSLESPLPTGL | 619 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi5g05903 | 619 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 429 | 512 | IPR018108 | - | |
Vivi5g05903 | 619 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 520 | 608 | IPR018108 | - | |
Vivi5g05903 | 619 | SUPERFAMILY | Mitochondrial carrier | 339 | 605 | IPR023395 | - | |
Vivi5g05903 | 619 | Pfam | Mitochondrial carrier protein | 430 | 514 | IPR018108 | - | |
Vivi5g05903 | 619 | Pfam | Mitochondrial carrier protein | 521 | 610 | IPR018108 | - | |
Vivi5g05903 | 619 | Pfam | Mitochondrial carrier protein | 340 | 421 | IPR018108 | - | |
Vivi5g05903 | 619 | FunFam | Mitochondrial substrate carrier protein-like | 463 | 619 | - | - | |
Vivi5g05903 | 619 | Gene3D | Mitochondrial carrier domain | 318 | 429 | IPR023395 | - | |
Vivi5g05903 | 619 | Gene3D | Mitochondrial carrier domain | 430 | 618 | IPR023395 | - | |
Vivi5g05903 | 619 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 336 | 420 | IPR018108 | - | |
Vivi5g05903 | 619 | PANTHER | S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN | 315 | 612 | - | - | |
Vivi5g05903 | 619 | FunFam | Mitochondrial substrate carrier protein-like | 316 | 462 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi5g05903 | Vivi-Chr5 | 163215590 | 163220215 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi5g05903 | 344 | 609 | Chloroplast and Mitochondria Gene Families | AT2G30160 | 32.500 | 2.04e-32 | 126 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi5g05903 | 5 | 163215590 | 163220215 | Vivi5g05903 | 5 | 163215590 | 163220215 | ECH |