Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05903 ATGTCTGGATGCAATAAATCGCCTAAAAATGTTCAACATTCCGTCAAGTATTGGTCGATTCAAGACGGAGTGATATCCTCTAAGGTTGATCCTTCTCGTGTAGATTGTTCGCCGTCTCTTTCCTATAATGAGAATAAGCAATGCTGTAAATATTCTCGAATGAAGTCCCCTGAGATACTGACAACACCTCAGCTCATTTCTGCAATTCGCCACTTATGGGATTCTGCTAGTCGGCCGCTGTCTTTTTTACTCCCGAAGGAAAATGTGAACCGAGATTATGACGACAAAGGATTCTCAAAAGATGAAATTATCAGTTGCGTTCATAAAAGAAATGGTGTGGTTAATTCAGATACAACTAATTATTATTCGGTTAATCCGGGCGCTACTCGCTTCGGTTCACAAATTTTGCAGGAAAAATTGGATTTCCCTACGGTAACACAGAAGATGTTGATGCTTAAATCTTCTTATGGAAACCGAGATTATATTCATTCTTTATTCCAGAGAGTTGTGCAGGCACATGATAAAAATTCAAATGAATATTGTAATGAAAAGGAACTTGGGAGTAAAGATACTGAGCCGGAGAACCTGGAAAATAGTTCTTTGGTTGCGAGGGATTGCATTTCAATAGACACGAGTACCACTTCGTTGGTTAAGGAAAGCGATGTGTGTGATCCTGTTGTACTAATACATGAAGCTTCATCATTATCTAATGATGAAGTTCCTATGACAAAAGAAGTTAACCCACTTTGTTCAGACTATTTTCTTCAAGCTGTACCTGATAATCGGATGGAAGATGATGCTTGTCGGACCCTATCTTCTAGTATATATGCAGATTATCATATTAACGGCTCTTTAGCTACCTCTAACAGTGCTTCTGTGCAGTGCCAATATAAGATTGATGATAATGAATTAATGGAAATTCAAAGAAGAAATTTATTAGATATAAGTGATAATGAACGAAAGGTTCAGATTTTCTCTGCGAATCATAAGCAGGCTTCCCATTTCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCGATGGCTGGAGTGTGTGTCAGCTGTTGTCTGCATCCGGTTGACACAATCAAGACAGTCATTCAATCATGTCGTGCAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTTCCTGGACTATATCGTGGAATTACTACAAACATTGCTTGTTCAGCTCCAATTTCTGCAGTTTACACTTTCACTTATGAATCAGTTAAAGCAGTTTTGCTTCCTTATCTGCCAAAGGAGTATTATTCCTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCTACATCTTTCATCTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAATTGGATCTCATTATCGCAACTGCTGGGATGCATTGGTTGGAATTATCAGAAATGGTGGTCTTTACTCGCTATATGCGGGTTGGAAAGCTGTATTGTGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCCTGAAGCAAGTGATGCCATCTTCTAGTATTCAATCCCACACACTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCGTTTGATGTCATCAAGACAAGATTACAGACACAGATTCCGGGATCAAGAAATCAATATGATAGTGTGTTTCACGCCCTTTACAAAATTAGCAAGACGGAAGGTTTGAAGGGCTTGTACAGGGGGTTGACACCGAGGCTGATTATGTACATGTCTCAAGGATCATTGTTCTTTGCTTCATATGAATTTTTCAAAAGTGTATTTTCTCTGGAATCACCACTTCCCACTGGTTTATAA 1860 0.3935 MSGCNKSPKNVQHSVKYWSIQDGVISSKVDPSRVDCSPSLSYNENKQCCKYSRMKSPEILTTPQLISAIRHLWDSASRPLSFLLPKENVNRDYDDKGFSKDEIISCVHKRNGVVNSDTTNYYSVNPGATRFGSQILQEKLDFPTVTQKMLMLKSSYGNRDYIHSLFQRVVQAHDKNSNEYCNEKELGSKDTEPENLENSSLVARDCISIDTSTTSLVKESDVCDPVVLIHEASSLSNDEVPMTKEVNPLCSDYFLQAVPDNRMEDDACRTLSSSIYADYHINGSLATSNSASVQCQYKIDDNELMEIQRRNLLDISDNERKVQIFSANHKQASHFLAKQEHAFSGAMAGVCVSCCLHPVDTIKTVIQSCRAEQRSIFYIGKSIVSDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAVLLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQIGSHYRNCWDALVGIIRNGGLYSLYAGWKAVLCRNIPHSMIKFYTYESLKQVMPSSSIQSHTLQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSRNQYDSVFHALYKISKTEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKSVFSLESPLPTGL 619
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05903 619 ProSiteProfiles Solute carrier (Solcar) repeat profile. 429 512 IPR018108 -
Vivi5g05903 619 ProSiteProfiles Solute carrier (Solcar) repeat profile. 520 608 IPR018108 -
Vivi5g05903 619 SUPERFAMILY Mitochondrial carrier 339 605 IPR023395 -
Vivi5g05903 619 Pfam Mitochondrial carrier protein 430 514 IPR018108 -
Vivi5g05903 619 Pfam Mitochondrial carrier protein 521 610 IPR018108 -
Vivi5g05903 619 Pfam Mitochondrial carrier protein 340 421 IPR018108 -
Vivi5g05903 619 FunFam Mitochondrial substrate carrier protein-like 463 619 - -
Vivi5g05903 619 Gene3D Mitochondrial carrier domain 318 429 IPR023395 -
Vivi5g05903 619 Gene3D Mitochondrial carrier domain 430 618 IPR023395 -
Vivi5g05903 619 ProSiteProfiles Solute carrier (Solcar) repeat profile. 336 420 IPR018108 -
Vivi5g05903 619 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 315 612 - -
Vivi5g05903 619 FunFam Mitochondrial substrate carrier protein-like 316 462 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi5g05903 Vivi-Chr5 163215590 163220215 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05903 344 609 Chloroplast and Mitochondria Gene Families AT2G30160 32.500 2.04e-32 126
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05903 5 163215590 163220215 Vivi5g05903 5 163215590 163220215 ECH