Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05902 ATGTCTGGATGCAATAAATCGCCTAAAAATGTTCAACATTCCGTCAAGTATTGGTCGATTCAAGACGGAGTGATATCCTCTAAGGTTGATCCTTCTCGTGTAGATTGTTCGCCGTCTCTTTCCTATAATGAGAATAAGCAATGCTGTAAATATTCTCGAATGAAGTCCCCTGAGATACTGACAACACCTCAGCTCATTTCTGCAATTCGCCACTTATGGGATTCTGCTAGTCGGCCGCTGTCTTTTTTACTCCCGAAGGAAAATGTGAACCGAGATTATGACGACAAAGGATTCTCAAAAGATGAAATTATCAGTTGCGTTCATAAAAGAAATGGTGTGGTTAATTCAGATACAACTAATTATTATTCGGTTAATCCGGGCGCTACTCGCTTCGGTTCACAAATTTTGCAGGAAAAATTGGATTTCCCTACGGTAACACAGAAGATGTTGATGCTTAAATCTTCTTATGGAAACCGAGATTATATTCATTCTTTATTCCAGAGAGTTGTGCAGGCACATGATAAAAATTCAAATGAATATTGTAATGAAAAGGAACTTGGGAGTAAAGATACTGAGCCGGAGAACCTGGAAAATAGTTCTTTGGTTGCGAGGGATTGCATTTCAATAGACACGAGTACCACTTCGTTGGTTAAGGAAAGCGATGTGTGTGATCCTGTTGTACTAATACATGAAGCTTCATCATTATCTAATGATGAAGTTCCTATGACAAAAGAAGTTAACCCACTTTGTTCAGACTATTTTCTTCAAGCTGTACCTGATAATCGGATGGAAGATGATGCTTGTCGGACCCTATCTTCTAGTATATATGCAGATTATCATATTAACGGCTCTTTAGCTACCTCTAACAGTGCTTCTGTGCAGTGCCAATATAAGATTGATGATAATGAATTAATGGAAATTCAAAGAAGAAATTTATTAGATATAAGTGATAATGAACGAAAGGTTCAGATTTTCTCTGCGAATCATAAGCAGGCTTCCCATTTCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCGATGGCTGGAGTGTGTGTCAGCTGTTGTCTGCATCCGGTTGACACAATCAAGACAGTCATTCAATCATGTCGTGCAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTTCCTGGACTATATCGTGGAATTACTACAAACATTGCTTGTTCAGCTCCAATTTCTGCAGTTTACACTTTCACTTATGAATCAGTTAAAGCAGTTTTGCTTCCTTATCTGCCAAAGGTATATTATTCCTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCTACATCTTTCATCTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAATTGGATCTCATTATCGCAACTGCTGGGATGCATTGGTTGGAATTATCAGAAATGGTGGTCTTTACTCGCTATATGCGGGTTGGAAAGCTGTATTGTGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCCTGAAGCAAGTGATGCCATCTTCTAGTATTCAATCCCACACACTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCGTTTGATGTCATCAAGACAAGATTACAGACACAGATTCCGGGATCAAGAAATCAATATGATAGTGTGTTTCACGCCCTTTACAAAATTAGCAAGACGGAAGGTTTGAAGGGCTTGTACAGGGGGTTGACACCGAGGCTGATTATGTACATGTCTCAAGGATCATTGTTCTTTGCTTCATATGAATTTTTCAAAAGTGTATTTTCTCTGGAATCACCACTTCCCACTGGTTTATAA 1860 0.393 MSGCNKSPKNVQHSVKYWSIQDGVISSKVDPSRVDCSPSLSYNENKQCCKYSRMKSPEILTTPQLISAIRHLWDSASRPLSFLLPKENVNRDYDDKGFSKDEIISCVHKRNGVVNSDTTNYYSVNPGATRFGSQILQEKLDFPTVTQKMLMLKSSYGNRDYIHSLFQRVVQAHDKNSNEYCNEKELGSKDTEPENLENSSLVARDCISIDTSTTSLVKESDVCDPVVLIHEASSLSNDEVPMTKEVNPLCSDYFLQAVPDNRMEDDACRTLSSSIYADYHINGSLATSNSASVQCQYKIDDNELMEIQRRNLLDISDNERKVQIFSANHKQASHFLAKQEHAFSGAMAGVCVSCCLHPVDTIKTVIQSCRAEQRSIFYIGKSIVSDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAVLLPYLPKVYYSFAHCVGGGCASIATSFIFTPSERIKQQMQIGSHYRNCWDALVGIIRNGGLYSLYAGWKAVLCRNIPHSMIKFYTYESLKQVMPSSSIQSHTLQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSRNQYDSVFHALYKISKTEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKSVFSLESPLPTGL 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05902 619 ProSiteProfiles Solute carrier (Solcar) repeat profile. 429 512 IPR018108 -
Vivi5g05902 619 ProSiteProfiles Solute carrier (Solcar) repeat profile. 520 608 IPR018108 -
Vivi5g05902 619 ProSiteProfiles Solute carrier (Solcar) repeat profile. 336 420 IPR018108 -
Vivi5g05902 619 FunFam Mitochondrial substrate carrier protein-like 462 619 - -
Vivi5g05902 619 SUPERFAMILY Mitochondrial carrier 339 605 IPR023395 -
Vivi5g05902 619 Gene3D Mitochondrial carrier domain 430 618 IPR023395 -
Vivi5g05902 619 Gene3D Mitochondrial carrier domain 318 429 IPR023395 -
Vivi5g05902 619 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 315 612 - -
Vivi5g05902 619 Pfam Mitochondrial carrier protein 340 422 IPR018108 -
Vivi5g05902 619 Pfam Mitochondrial carrier protein 521 610 IPR018108 -
Vivi5g05902 619 Pfam Mitochondrial carrier protein 431 514 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05902 Vivi-Chr5 163215589 163220215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05902 344 609 Chloroplast and Mitochondria Gene Families AT2G30160 32.500 3.97e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05902 - - gmx:100812271 821.231