Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05885 ATGAAGCTGAAAGTGTATGCTGACCGCATGTCCCAGCCATCCCGCGCGATTCTCATCTTTTGCAAAGTCAATGGGATAGAATTCGAGGAGATCCATATCGAACTTTCCAAACGCCAGCATCTATCTCCAGAATTTCAAGAGATTAACCCTCTCAAGAAAGTTCCTGTTATTGTTGATGGAAGGTACAAGCTATTCGAGAGTCATGCAATTCTTATCTATATTGCTTCTGCATTTCCTGGAGTTGCAAACCATTGGTACCCAGCTGATGCTTCAAGGAAAGCTAAAATTCATTCAGTGTTAGATTGGCATCACCTGAATTTGCGCCGCGGAGCAGCCGGATATGTTCTAAATACTGTATTAGCTCCATTATTGGGTCTACCACTAAATGCACAAGCAGCTGTTGAAGCTGAGAAAGTTTTGGTATCATCTCTGTCCACAATAGAGAACATTTGGCTTAAGAGTGACGGACCGTTCTTGCTTGGCAGCTTCCGACCTTCCATAGCAGATCTCAGTCTTGTCTGTGAAATTATGCAATTACAGCTTTTAGACCAGAAAGAGCATGATCGTATTATTGGCCCATACAAGAAAGTTCAACAATGGATTGAGAGCACAAAAAATGCAACGAAACCACATTTTGATGAAGTTCATAATGTCCTCTATAAACTCAAAGCGAGGCTTTCCGTGCGGCAATCTAGTAAAGCAGATGGCCAAATTAAATCTGGGAATAAAGCTCCCATAATTTCAAAGATGTGA 753 0.417 MKLKVYADRMSQPSRAILIFCKVNGIEFEEIHIELSKRQHLSPEFQEINPLKKVPVIVDGRYKLFESHAILIYIASAFPGVANHWYPADASRKAKIHSVLDWHHLNLRRGAAGYVLNTVLAPLLGLPLNAQAAVEAEKVLVSSLSTIENIWLKSDGPFLLGSFRPSIADLSLVCEIMQLQLLDQKEHDRIIGPYKKVQQWIESTKNATKPHFDEVHNVLYKLKARLSVRQSSKADGQIKSGNKAPIISKM 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05885 250 SUPERFAMILY GST C-terminal domain-like 83 215 IPR036282 -
Vivi5g05885 250 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Vivi5g05885 250 CDD GST_C_Theta 92 222 IPR040077 -
Vivi5g05885 250 Pfam Glutathione S-transferase, C-terminal domain 135 202 - -
Vivi5g05885 250 Gene3D - 83 243 - -
Vivi5g05885 250 FunFam Glutathione S-transferase theta-1 83 231 - -
Vivi5g05885 250 CDD GST_N_Theta 3 78 IPR040075 -
Vivi5g05885 250 Gene3D Glutaredoxin 1 82 - -
Vivi5g05885 250 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vivi5g05885 250 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 235 IPR043377 -
Vivi5g05885 250 SFLD Main.4: Theta-like 1 225 - -
Vivi5g05885 250 SFLD Main (cytGST) 1 225 - -
Vivi5g05885 250 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05885 Vivi-Chr5 163089061 163094330 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05885 1 230 Glutathione S-transferase Gene Family AT5G41210 70.435 2.95e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05885 K00799 - gmx:547979 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05885 5 163089061 163094330 Vivi5g05885 5 163089061 163094330 ECH