Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05880 ATGGAGAAGAAGCTGAAGGTGTATGCAGATCGTATGTCCCAACCATCTCGAGCAGTTCTGATATTCTGCAGGTTGAACGGCATCGACTTTGAGGAGATCAAAATTGACACCTCCAAACGCCACCAACTATCTCCTGAATATACAGAAGTTGGCCATCCACTGAATCCAAAAGCAGCTTCTGAAGCAGAGAAAATTTTATTATCTTCTTTATCAATTCTAGAGAAAATTTGGCTAAATGGAGATGGACGATTCCTTCTTGGTGGCTTTCAACCGTCTATAGCAGATCTCAGTCTGGTTTGTGAACTCATACAACTTGAGGTTTTGGATGAGAAAGATCGCAATCGAATATTATCACCGTACAAGAAAGTTGTTCAGTGGATTGAGGATACAAGAGCTGCAACAAATCCTCACTTTGAACAAGTGCATAATATCCTTTATAGAGTTAAAAAGAAACTCCAACAACAGCGTTCAAGGGATGCTGAAGCCGGGACTGAGACTCGCAACAAGATGGGGAGGCATTCTAAGATGTGA 531 0.4162 MEKKLKVYADRMSQPSRAVLIFCRLNGIDFEEIKIDTSKRHQLSPEYTEVGHPLNPKAASEAEKILLSSLSILEKIWLNGDGRFLLGGFQPSIADLSLVCELIQLEVLDEKDRNRILSPYKKVVQWIEDTRAATNPHFEQVHNILYRVKKKLQQQRSRDAEAGTETRNKMGRHSKM 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05880 176 Pfam Glutathione S-transferase, C-terminal domain 58 128 - -
Vivi5g05880 176 SUPERFAMILY GST C-terminal domain-like 50 150 IPR036282 -
Vivi5g05880 176 SUPERFAMILY Thioredoxin-like 4 50 IPR036249 -
Vivi5g05880 176 Gene3D - 38 169 - -
Vivi5g05880 176 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 4 50 IPR043377 -
Vivi5g05880 176 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05880 Vivi-Chr5 163001664 163002948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05880 4 55 Glutathione S-transferase Gene Family AT5G41210 65.385 7.14e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05880 K00799 - gmx:100799229 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05880 5 163001664 163002948 Vivi5g05880 5 163001664 163002948 ECH