Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05879 ATGGAGAAGAAGCTGAAGGTGTATGCAGATCGTATGTCCCAACCATCTCGAGCAGTTCTGATATTCTGCAGGTTGAACGGCATCGACTTTGAGGAGATCAAAATTGACACCTCCAAACGCCACCAACTATCTCCTGAATATACAGTTGGCCATCCACTGAATCCAAAAGCAGCTTCTGAAGCAGAGAAAATTTTATTATCTTCTTTATCAATTCTAGAGAAAATTTGGCTAAATGGAGATGGACGATTCCTTCTTGGTGGCTTTCAACCGTCTATAGCAGATCTCAGTCTGGTTTGTGAACTCATACAACTTGAGGTTTTGGATGAGAAAGATCGCAATCGAATATTATCACCGTACAAGAAAGTTGTTCAGTGGATTGAGGATACAAGAGCTGCAACAAATCCTCACTTTGAACAAGTGCATAATATCCTTTATAGAGTTAAAAAGAAACTCCAACAACAGCGTTCAAGGGATGCTGAAGCCGGGACTGAGACTCGCAACAAGATGGGGAGGCATTCTAAGATGTGA 528 0.4167 MEKKLKVYADRMSQPSRAVLIFCRLNGIDFEEIKIDTSKRHQLSPEYTVGHPLNPKAASEAEKILLSSLSILEKIWLNGDGRFLLGGFQPSIADLSLVCELIQLEVLDEKDRNRILSPYKKVVQWIEDTRAATNPHFEQVHNILYRVKKKLQQQRSRDAEAGTETRNKMGRHSKM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05879 175 Pfam Glutathione S-transferase, C-terminal domain 57 127 - -
Vivi5g05879 175 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 4 48 IPR043377 -
Vivi5g05879 175 SUPERFAMILY Thioredoxin-like 4 53 IPR036249 -
Vivi5g05879 175 SUPERFAMILY GST C-terminal domain-like 49 149 IPR036282 -
Vivi5g05879 175 Gene3D - 35 168 - -
Vivi5g05879 175 MobiDBLite consensus disorder prediction 154 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05879 Vivi-Chr5 163001664 163002950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05879 4 54 Glutathione S-transferase Gene Family AT5G41210 66.667 6.21e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05879 K00799 - gmx:100799229 197.978