Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05812 ATGGAAAGAACGATGGAACTCAAGGAATTTATCAAATTCAACTTTTTTTCTTTGATGAATGAATTCTATTTTGAGGTTTTTAAAAGTGGTCCACTTTTCATATCTTCCAAAGGAATAGGCTGGAAGTCATGGAAGAAGAGGTGGTTTATACTCACGCGCACATCATTGGTTTTCTTCAAAAATGATCCTGGAACGAAGTCTATTAAAGGGTTGGCTTTGAAGTTACCCAAAGCTAAGGCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGACGAAACTAAGATTACTTCAACTTGCTGGAGTTAAACTTGGTGGAGATTTTGAATATCTTTCAAAAAATCTGAGATGGCTGTCTTGGAATGGATTTCCCTTAACACATATTCCTACGAACTTTTGTCGAGAATATTTGGTTTTCATTGAGTTAGAGAACAGCAATGTCCAACGTATGTGGAAAGCTATGGCTACCATTAATGGGAACACTGATGCTTCTCAACCCATTGTTGCTCCTACAAAACACTCTCTTCCTCCTAAAACCGTCGATTCTAAATCCGTTCTCAAAAGTGTGCGGTGTGTTCGTGTCTATCATATTTTCCCCCTTTTTGGCGCAACAATTTCAAATACTTATACTACACCCAAATGA 642 0.3692 MERTMELKEFIKFNFFSLMNEFYFEVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPGTKSIKGLALKLPKAKAKCFSTKAFKKMTKLRLLQLAGVKLGGDFEYLSKNLRWLSWNGFPLTHIPTNFCREYLVFIELENSNVQRMWKAMATINGNTDASQPIVAPTKHSLPPKTVDSKSVLKSVRCVRVYHIFPLFGATISNTYTTPK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05812 213 ProSiteProfiles PH domain profile. 25 160 IPR001849 -
Vivi5g05812 213 Pfam PH domain 27 69 IPR001849 -
Vivi5g05812 213 SUPERFAMILY PH domain-like 25 74 - -
Vivi5g05812 213 Gene3D - 19 104 IPR011993 -
Vivi5g05812 213 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 25 70 - -
Vivi5g05812 213 SUPERFAMILY L domain-like 73 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05812 Vivi-Chr5 161929589 161935044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05812 59 164 WRKY Transcription Factor Family AT4G12020 34.211 5.52e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05812 - - vvo:131603601 425.631