Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05809 ATGGAAAGAACGATGGAACTCAAGGAATTTATCAAATTCAACTTTTTTTCTTTGATGAATGAATTCTATTTTGAGGTTTTTAAAAGTGGTCCACTTTTCATATCTTCCAAAGGAATAGGCTGGAAGTCATGGAAGAAGAGGTGGTTTATACTCACGCGCACATCATTGGTTTTCTTCAAAAATGATCCTGGAACGAAGTCTATTAAAGGGTTGGCTTTGAAGTTACCCAAAGCTAAGGCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGACGAAACTAAGATTACTTCAACTTGCTGGAGTTAAACTTGGTGGAGATTTTGAATATCTTTCAAAAAATCTGAGATGGCTGTCTTGGAATGGATTTCCCTTAACACATATTCCTACGAACTTTTGTCGAGAATATTTGGTTTTCATTGAGTTAGAGAACAGCAATGTCCAACGTATGTGGAAAGCTATGGCTACCATTAATGGGAACACTGATGCTTCTCAACCCATTGTTGCTCCTACAAAACACTCTCTTCCTCCTAAAACCGTCGATTCTAAATCCGTTCTCAAAAGTGTGCGGTGTGTTCGTGTCTATCATATTTTCCCCCTTTTTGGCGCAACAATTTCAAATACTTATACTACACCCAAATGA 642 0.3692 MERTMELKEFIKFNFFSLMNEFYFEVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPGTKSIKGLALKLPKAKAKCFSTKAFKKMTKLRLLQLAGVKLGGDFEYLSKNLRWLSWNGFPLTHIPTNFCREYLVFIELENSNVQRMWKAMATINGNTDASQPIVAPTKHSLPPKTVDSKSVLKSVRCVRVYHIFPLFGATISNTYTTPK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05809 213 ProSiteProfiles PH domain profile. 25 160 IPR001849 -
Vivi5g05809 213 Pfam PH domain 27 69 IPR001849 -
Vivi5g05809 213 SUPERFAMILY PH domain-like 25 74 - -
Vivi5g05809 213 Gene3D - 19 104 IPR011993 -
Vivi5g05809 213 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 25 70 - -
Vivi5g05809 213 SUPERFAMILY L domain-like 73 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05809 Vivi-Chr5 161929589 161935044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05809 59 164 WRKY Transcription Factor Family AT4G12020 34.211 5.52e-12 62.8