Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05782 ATGGAGAAACATGAAGTGTTATTGCCTATCTCAGCTTCACTTGATGCTTCTCCTTTTGAAGTTAATCGCGGTAGTTGCTCTAATGTTCAAGTTCAAAATGAAATAAAATCTAAAAGAAAAGAGAAATTAAGCGAGAGAAACTGCAAAGAAATCATGAAGCACAGATATGTATTTCAAACAAGGAGTCAGATTGATATACTAGATGATGGGTTCAAGTGGAGAAAGTATGGAGAAAAGTTAGTGAAAAATAGCAAATTCCCTAGGAGTTATTACAAATGCTCGTATCGAGGATGCAATGTAAGAAAACAAATCCAAAGACATTCCAAAGACGAGCAGATCGTGGAAACAACTTATGAAGGGATGCATATTCACCCTGTCGAGAAGTCGGCTGAAAGCTTTGACCAGATCTTGAGAAGCTTTATTACAAGCAATCAACTAAATAATGTAAAGTATAATGTCTAG 462 0.3571 MEKHEVLLPISASLDASPFEVNRGSCSNVQVQNEIKSKRKEKLSERNCKEIMKHRYVFQTRSQIDILDDGFKWRKYGEKLVKNSKFPRSYYKCSYRGCNVRKQIQRHSKDEQIVETTYEGMHIHPVEKSAESFDQILRSFITSNQLNNVKYNV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05782 153 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 131 IPR044810 GO:0003700
Vivi5g05782 153 Gene3D WRKY domain 54 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g05782 153 ProSiteProfiles WRKY domain profile. 62 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g05782 153 Pfam WRKY DNA -binding domain 68 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g05782 153 SMART WRKY_cls 67 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g05782 153 FunFam WRKY transcription factor 57 53 127 - -
Vivi5g05782 153 SUPERFAMILY WRKY DNA-binding domain 59 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05782 Vivi-Chr5 161696221 161697076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05782 55 137 WRKY Transcription Factor Family AT5G13080 68.675 4.96e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi5g05782 WRKY 3.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05782 5 161696221 161697076 Vivi5g05782 5 161696221 161697076 ECH