Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05774 ATGAATTTTGTGAAGAAGTGTAAGAGGGTATGGGGAAGCAGCAAGAGATTGTATGATCCACAAGATACTAGTAGCAATGGCAGCTATGGAAAATTATCAGAAAAGTGTCACAAAAAGCAAAAAGATAATACCAAGAAACCACCACATGGTTGTCTTTGTGTGTATGTTGGACCTGAGAGACAAAGATTCGTAATCAAGATCAAAATATTCAATCACCCTTTGTTCAAAACACTTTTAGAAGATGTTGAGAATGAATATGGATATGGAAATGATGGTCCTCTATGGCTTCCTTGTGATGTTGACTTGTTCTATGAAGCACTTGTGGAGATAGAAAGTGGTGAAGATGATATGGCTTTTGTGGGATGCAATTTCTCGATAGGTCACAAACACAGCTCAGTTTCACAATATTCTCCATTCTCTTGTCGTTCTAACTTGAGTTCGTGTGATGTAAATTACGAGGTTTTAGTATAA 471 0.3694 MNFVKKCKRVWGSSKRLYDPQDTSSNGSYGKLSEKCHKKQKDNTKKPPHGCLCVYVGPERQRFVIKIKIFNHPLFKTLLEDVENEYGYGNDGPLWLPCDVDLFYEALVEIESGEDDMAFVGCNFSIGHKHSSVSQYSPFSCRSNLSSCDVNYEVLV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05774 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 107 IPR003676 GO:0009733
Vivi5g05774 156 Pfam Auxin responsive protein 29 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05774 Vivi-Chr5 161522729 161523199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05774 48 108 Calmodulin-binding Proteins AT4G34750 45.902 5.50e-16 68.9