Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05773 ATGAATTTAGTGAAGAAGTGTAAGAGAGTATGGGGAAGCAGCAAGAGATTGTGTGATGCACAAGACAGTACTAGCAGTGGCAGCTATGGAAAATTATCAGAAAAGTGTCACAAAAAGCAAAAAGATAATACTAAGAAAGCACCAAATGGTTGTCTTTGTGTCTATGTTGGACCTGAGAGACAGAGATTCGTAATCAAGATCAAAATATTCAATCACCCTTTGTTCAAAACTCTTTTGGAAGGTGTTGAGAATGAATATGGATATAGAAACGATGGTCCTCTATGGCTTCCTTGTCATGTTGACATGTTCTGTGAAGCACTTGTGGAGATAGAGAGTGATGAGGTTGATATGGGTTTTGTAGGTTGCAATTTTCCAATGAGTCACAAACACAGCTCAGCTTCACAATATTCTCCGTTGTCTTGTCGTTCTAACTTGAGTTCATATGATGCAAATTATGAGGTTTTGGTATGA 471 0.38 MNLVKKCKRVWGSSKRLCDAQDSTSSGSYGKLSEKCHKKQKDNTKKAPNGCLCVYVGPERQRFVIKIKIFNHPLFKTLLEGVENEYGYRNDGPLWLPCHVDMFCEALVEIESDEVDMGFVGCNFPMSHKHSSASQYSPLSCRSNLSSYDANYEVLV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05773 156 Pfam Auxin responsive protein 26 107 IPR003676 GO:0009733
Vivi5g05773 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05773 Vivi-Chr5 161501609 161502079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05773 47 103 Calmodulin-binding Proteins AT3G43120 50.877 1.69e-15 67.8