Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05771 ATGGGTTTTGTGAAGAAGTGTATGACAGTTTGGGGAAGCAACAATAGATTGTATCCAGAAGAAACTTGCAGTGGAAGCTATGGAAAATTATCATCAGACAGGAGCAACAAACAAAAAGATAATAATAAGAATACTAAGAAAGCACCAAATGGCTGTGTTTGTGTCTATGTTGGATCTGAGAGACAAAGATTCATAATCAAGATCAAAATATTCAACCACCCTTTGTTCAAAACGCTTTTAGAAGATGTTGAGAATGAATATGGATATAGAAACGATGGTCCTCTATGGCTTCCTTGTCATGTTGACTTTTTCTGTGAAGCACTAGAGGATATTGAGAGTGTTGAGGATGATATCGGTTTTGTAGGATGTAGCTTTCCAATGAATCGCAAGCCCATCACAGTTTTCAATTCGTCACTGTCTTGA 423 0.3712 MGFVKKCMTVWGSNNRLYPEETCSGSYGKLSSDRSNKQKDNNKNTKKAPNGCVCVYVGSERQRFIIKIKIFNHPLFKTLLEDVENEYGYRNDGPLWLPCHVDFFCEALEDIESVEDDIGFVGCSFPMNRKPITVFNSSLS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05771 140 Pfam Auxin responsive protein 35 109 IPR003676 GO:0009733
Vivi5g05771 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05771 Vivi-Chr5 161461937 161462359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05771 41 114 Calmodulin-binding Proteins AT4G34750 41.892 7.12e-16 68.2