Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05770 ATGGGTTTTGTGAAGAAGTGTATGACAGTTTGGGGAAGCAACAATAGATTGTATCCAGAAGAAACTTGCAGTGGAAGCTATGGAAAATTATCATCAGACAGGAGCAACAAACAAAAAGATAATAATAAGAATACTAAGAAACCACCAAATGGTTGTGTTTGTGTCTATGTTGGACCTGAGAGACAGAGATTCGTAATCAAGATCAAAATATGCAATCACCCTTTGTTCAAAACGCTTTTGGAAGGTGTTGAGAATGAATATGGATATAGAAATGATGGTCCTCTATGGCTTCCTTGCGATGTTGGTTTTTTTTGTGAAGCACTTGCAGAAATTGAGAGTGTTGAGGAGGATATCGGTTTTGTAGGAGATAGCTTTCGAATGAATCGCAAGCCAATCACAGTTTCCAATTCGTCACTACTGTCTTGCCGTTCTAGCATGATTTGTGTTTCCAGTTGA 456 0.3838 MGFVKKCMTVWGSNNRLYPEETCSGSYGKLSSDRSNKQKDNNKNTKKPPNGCVCVYVGPERQRFVIKIKICNHPLFKTLLEGVENEYGYRNDGPLWLPCDVGFFCEALAEIESVEEDIGFVGDSFRMNRKPITVSNSSLLSCRSSMICVSS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05770 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 106 IPR003676 GO:0009733
Vivi5g05770 151 Pfam Auxin responsive protein 35 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05770 Vivi-Chr5 161452886 161453552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05770 41 109 Calmodulin-binding Proteins AT4G34750 44.928 6.95e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05770 K14488 - gmx:102667331 135.576