Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05769 ATGAATTTAGTGAAGAAGTGTAAGAGGGTATGCGGAAGCAGCAATAGATTGTATGATTCAGAAGACAGTACTCGTAGTTGCAGCTATGACAAATTATCAGAAAAGTTCCAGAAAAAGCAAAAAAATGATACTAAGAAACCACCAAATGGTTGTGTTTGTGTCTATGTTGGATCTGAGAGACAGAGATTTGTAATCAAGATCAAAATATTCAACCACCCTTTGTTTAAAACACTTTTAGAAGATGTTGAGAATGAATATGGATATAGAAACGATGGTCCTCTATGGCTTCCTTGTCATGTTGACTTGTTCTATGAAGCACTTGTGGAGATAGAAAGTGCTTTTGGTTGCAGCTTTCCAACTGTTCACAAAAACAGCCCAGTTTCAAGTTCTTTATTGTACGTCCTGTCGTTCTAA 414 0.3647 MNLVKKCKRVCGSSNRLYDSEDSTRSCSYDKLSEKFQKKQKNDTKKPPNGCVCVYVGSERQRFVIKIKIFNHPLFKTLLEDVENEYGYRNDGPLWLPCHVDLFYEALVEIESAFGCSFPTVHKNSPVSSSLLYVLSF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05769 137 Pfam Auxin responsive protein 29 107 IPR003676 GO:0009733
Vivi5g05769 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05769 Vivi-Chr5 161445243 161445656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05769 48 129 Calmodulin-binding Proteins AT4G34750 40.244 8.97e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05769 K14488 - vvo:131618933 132.88