Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05768 ATGGATTTTGTGAAGAAGGGTAAGAGTCTATTGAGAAGCTGCAAGTTATCTTCAAAGACAAGGGTCAAAAAACAAAAAGACGGTCATAAGAAACCACGACATGGCTGTGTTTGTGTCTACGTTGGAGATGAGAGACAGAGATTCATAATAAAGATCAAAATATTGATTCATCCTTTATTCAAGTCACTTCTAGAAGATGTTGAGAATGAATATGGATATGGAAACAATGGTCCTCTATGGCTTCCTTGCGACGTTGACATGTTCTGTGAAGCACTTGGGGAGATTAAAAGTGCTATGAGTGACATGGGTTGCAATTTTCCAATTAGTCATTGTAGTAGCATGAGTTGTGTTTCTAATTAA 360 0.3722 MDFVKKGKSLLRSCKLSSKTRVKKQKDGHKKPRHGCVCVYVGDERQRFIIKIKILIHPLFKSLLEDVENEYGYGNNGPLWLPCDVDMFCEALGEIKSAMSDMGCNFPISHCSSMSCVSN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05768 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 90 IPR003676 GO:0009733
Vivi5g05768 119 Pfam Auxin responsive protein 17 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05768 Vivi-Chr5 161437958 161438317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05768 35 88 Calmodulin-binding Proteins AT4G34750 48.148 1.66e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05768 K14488 - vvo:131618933 158.303