Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05765 ATGGATTTTGTGAAGAATTGTAAGAGTCTATTGAGAAGCTGCAAGTTATCTTCAAAGACAAGGGTCAAAAAGCAAAAAGACAGTCCTAAGAAACCACAACATGGCTGTGTTTGTGTCTACGTTGGAGATGAGAGACAGAGATTCATAATAAAAATCAAAATATTGAATCATCCTTTGTTCAAGTCACTTCTAGAAGATGTTGAGAATGAATATGGATATGGAAAGAATGGTCCTCTATGGCTTCCTTGCGACGTTGACATGTTCTGTGAAGCACTTGTGGAGATAAAAAGTGCTATGAGTGACATGGGTTGCAAATTTCCAATTAGTCATTATAGTAACATGATTTGTGTTTCTAATTAA 360 0.3556 MDFVKNCKSLLRSCKLSSKTRVKKQKDSPKKPQHGCVCVYVGDERQRFIIKIKILNHPLFKSLLEDVENEYGYGKNGPLWLPCDVDMFCEALVEIKSAMSDMGCKFPISHYSNMICVSN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05765 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 92 IPR003676 GO:0009733
Vivi5g05765 119 Pfam Auxin responsive protein 7 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05765 Vivi-Chr5 161426069 161426428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05765 35 88 Calmodulin-binding Proteins AT4G34750 48.148 4.76e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05765 K14488 - vvo:131618933 162.925