Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05764 ATGTCACTCTTAAAGAAAGAGCTAAACTGCTGGGCTACAAGCAATGAGCTGACCGACCCTGGTAAGAGAGTATGGGGAAGCAGCAAGAGATTGTATGATCCACAAGACACTAGTTGCAATGGCAGCTATGGCAAATTATCAGAGAAGTTTCACAAAAAGCAAAAAGGTAATACTAAGAAACCACCACATGGTTGTCTTTGTGTCTATGTTGGACCTGAGAGACAGAGATTCGTAATCAAGATCAAAATATTCAATCATCCTTCCTTTAAAACACTTTTAGATGATGTTGAGATTGAATATGGTTATAGAAACGATGGTCCTTTATGGCTTCCATGTGATGTTGACATGTTCTGTGAAGCACTTGCGGAGATAGAGGGTCACAAACAAAGTTCAGTTTCACAATATTCTCCATTGTCTTGTCGTTCTAACTTGAGTTCAAGGGATGGAAATTACGAGGTTTTTGGATAA 468 0.391 MSLLKKELNCWATSNELTDPGKRVWGSSKRLYDPQDTSCNGSYGKLSEKFHKKQKGNTKKPPHGCLCVYVGPERQRFVIKIKIFNHPSFKTLLDDVEIEYGYRNDGPLWLPCDVDMFCEALAEIEGHKQSSVSQYSPLSCRSNLSSRDGNYEVFG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05764 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 55 119 IPR003676 GO:0009733
Vivi5g05764 155 Pfam Auxin responsive protein 53 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05764 Vivi-Chr5 161420953 161421549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05764 62 138 Calmodulin-binding Proteins AT3G43120 42.857 5.82e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05764 K14488 - gmx:102667331 134.806