Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05763 ATGGATTTCGTGAAGAAGTGTAAGATAGTATTGAGAAGCAACAAGAGCATGAAGAAGCAAAAAGATAATCCTAAGAAACCACCACATGGTTGTGTTTGTCTCTATGTTGGAGATGAGAGACAGAGATTCATAATAAAGATCAAAATATTGAATCATCCTTTGTTCAAGTCACTTCTAGAAGATGTTGAGAATGAATATGGATATGGAAACAATGGTCCTCTATGGCTTCCTTGCCACGTTGACATGTTCTGTGAAGCACTTGTGGATATAAAAAGTGCTATGAGTGACATGGGTTGCAATTTTCCAATAAGTCATTGTAGTAACATGAGTTGTGTTTCTAATTAA 345 0.3565 MDFVKKCKIVLRSNKSMKKQKDNPKKPPHGCVCLYVGDERQRFIIKIKILNHPLFKSLLEDVENEYGYGNNGPLWLPCHVDMFCEALVDIKSAMSDMGCNFPISHCSNMSCVSN 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05763 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 87 IPR003676 GO:0009733
Vivi5g05763 114 Pfam Auxin responsive protein 16 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05763 Vivi-Chr5 161411934 161412278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05763 28 83 Calmodulin-binding Proteins AT4G34750 46.429 5.11e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05763 K14488 - vvo:131618933 196.052