Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05761 ATGAATTTTGTAAAGAAGTGTAAGAGGGTATGGGGAAGCAACAAGAGATTGTATGATCCACAAGACACTAGTAGCCATGGCAGCTATGGAAATTTACCAGACAAGTGTCACAAAAAGCAAAAAGGTAATACTAAGAAACCACCAAATGGTTGTCTTTGTGTCTATGTTGGAGCTGAGAGACAGAGATTTGTAATCAAGATCAAAATAGTCAATCACCCTTTGTTTAAAATACTTTTGGAAGGTGTTGAGAATGAATATGGTTATAGAAACGATGGTCCTCTATGGCTTCCTTGTGATGTTGACATGTTCTGTGAAGCACTAGGGGAGATAGAGGGTCACAAACAAAGTTCAGTTTCACAATATTCTCCATTGTCTTGTCGTTCTAACTTGAGTTCATGGGATGGAAATTACGAGGTTTTAGTATGA 426 0.3779 MNFVKKCKRVWGSNKRLYDPQDTSSHGSYGNLPDKCHKKQKGNTKKPPNGCLCVYVGAERQRFVIKIKIVNHPLFKILLEGVENEYGYRNDGPLWLPCDVDMFCEALGEIEGHKQSSVSQYSPLSCRSNLSSWDGNYEVLV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05761 141 MobiDBLite consensus disorder prediction 22 48 - -
Vivi5g05761 141 Pfam Auxin responsive protein 28 107 IPR003676 GO:0009733
Vivi5g05761 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05761 Vivi-Chr5 161407302 161407727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05761 48 127 Calmodulin-binding Proteins AT3G43120 42.500 1.47e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05761 K14488 - gmx:102667331 138.272