Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05760 ATGGGTTTTGTGAGGAAGTGTAAGAGAGTATGGGGAAACAAAAACAGGTTGCATCCAGAACACAGTTACAAAAAGCAAAGAGATAATACTAAGAAACCACCAATTAATGGTTGTGTTTGTGTCTATGTTGGAGATGAGAGACAAAGATTTATAATCAAGATCAAAATATTCAACCACCCTTTGTTCAAAACTCTTTTAGAAGATGTTGAGAATGAATATGGATATGGAAAGGAAGGTCCTCTATGGCTTCCTTGTGATGTTGAATTTTTCTGTGAAGCACTTGAGGAGATAGAGGGTTCTGTGGATGAGATGAGTTTTGTTGGTTGCAATTTTCCAATGAGTCATAAATTTAGTCCAGTTCATAATTATCAGGTTTTGGTATGA 384 0.3568 MGFVRKCKRVWGNKNRLHPEHSYKKQRDNTKKPPINGCVCVYVGDERQRFIIKIKIFNHPLFKTLLEDVENEYGYGKEGPLWLPCDVEFFCEALEEIEGSVDEMSFVGCNFPMSHKFSPVHNYQVLV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05760 127 Pfam Auxin responsive protein 21 95 IPR003676 GO:0009733
Vivi5g05760 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05760 Vivi-Chr5 161399442 161399825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05760 33 90 Calmodulin-binding Proteins AT4G34750 46.552 1.08e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05760 K14488 - vvo:131618933 140.969