Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05739 ATGTTGGATATTGAATCGAGCTCCTTTTCTTGGGAGAGTCTCTCTTCACTGCACCATACTGAACACAGCAGTAGCAATGAGCATTCTGAGGATGAAATGAACAAGCCTCTTGAGGTAACCGTGAATTCTGGAGGTGTTGTATTTTTTGCCTTTTTCAATGGTCAAGGGAGTGCTGATGCTTTTCCGAGAGAGGAAGCAGCTGTTATAAAAATATCATCATCAAGAATGGCAACCCAATCTGAACGCCTTGGATATGAACTTGCTAAGTGGCTAGGAATCCAAACTCCGCAGGCTAGAGTCATTCATAATACCAGTTCAGAATGGCAACAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCGGCGGCAAATTCTCAGTGTGATGAAGTAGGTGAAGTGACGTGTTTTGAACTTTTGGAAGCTCTAGAGCTTAGCCGATGTCTATTTTTAATGAGTTATGTACATGGTTCACCTTTGCTTGAGAACACTAGTGCATTTGAGTCACGAGAATCTGCAGAAATAACATCAGAAGCTCTTGGCAGGGTACTGATGTTAGACCTAGTAATTCGAAATGAAGACAGGCTCCCTTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAACTTGCTGTTGGCTGAAAAGATGATCTCTGCAAATACAAATACACTAGAAGCAGCTTTGGATTCTGCAATGAATATTTATAGACCAAAGGTGGTTAGGGCACTTCAAAAAGAAAGAAGGTCGAGTTCAGTAGATAGCAGATTGGATTCCCATAATCCTGGCTTAATAATATCACAAGCCTCCGATCTTTCAGAAGCAACAGCATCGCCAATATCCGCGGACATAAGTCTTAAAAGTGAAGCATCAGAAGAATCAATATCTTCTGACCTTAACATTGTAGTCATTGATTCTGGTGTTCCTCGGCGACCCCCTATTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTAGTTGAATTGCTAATCAATAGTTCTGAGTATGCATCAAACCTGTTGCATGATATAACTGGAGGGAAATTAGGATGTCCTCTACCAGAAAACATGGATACAACTGATATACCTACAAGTCACATGAGATCAGTTCATGCCTTTCGTACCGGTTTTCGAGGTGCACTTAGGGATCTACAAGGATTTCATATATTCCTACTCACCCTACATCAAAGACTTGATACTTTGTTACGATCATTTATGAATATTATAAGCAAAATATCATCAGGGGAGTCTGACAGAGAGGACTTGTTGGTTCCTGATTCACCTTCCCTTTCACTGGCTAGTAGTGGTAGTTGTTGCTCTCCATCAAGTAAAGAGAGGCATGCCAATGATAACAATCAAGATTTCGCTGATTCAGAATCACAGAGATCTACTTCAAGGTCACTGTCTTCATGTAATAGAGATTGTAGTGACTCGACTTCTGGGTCCAAAGAAAATTGGCATGGGAAGTTCTCTAAAGGAAATGGAGAGTCACATCGTAATCTCCGTTTGACAGCTAAGCTCCGTGATTTTCATAAATTTGCCAAGGTTGATGCTGAATCTAGTAAAGAACTGGAACAGTGGAACGAAATGCTTAAAAATGATGCCGTCAAACTATGCCAGGAGAACAATTTCAATACAGGATTCTTCGAGGGTAGTGATAATAACAGTGTTGTTGATGCATATGAACTGAAGGTCCGACTTGAGCATATTCTAGAGAGAATTGCATTGATATCTGATGCTGCAAGTACCGAGAAACCGTCTGCTGTTACAAGCTTTCTGTTCATTGGTGGGGCACTGGCTGCAAGATCTGTATACACTCTGCAATACTTAGGAATTACACATATTTTGTGTTTGTGTACCAATGAAATTGGACAATCCGAAACTCAATTTCCTGATGTATTTGAATACCAAAATTTCTCTGTCTGTGACAGTGAAGATTTTAACATCACCACCGTATTTGATGAAGCATGTGATTTCATAGATTCTGTTGAACAAAAAGGTCAGAAAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGTGTTACATTGGTCCTTGCTTATCTAATGCTGAGGAAGAAGTATACTTTATCAAAAGCATGGCAAACAATGAAACAGGTTCACCGTCGAGCACAGCCAAATGATGGTTTCGCAAAGATCTTACAAGTTTTGGATCAGAAATTACATGGGAAGGTTTCAATGGAGTGGCAACAGAGGAAACCGACAATGAAAGTCTGTCCCATCTGTGGGAAAAATGCCGGGCTAAGCAGTAGCTCGCTAAAACTACACCTGCAGAAATCACATAGAAAGCTATCATCTGGTAGTGTAGATAGTGCCATGACAATGGAGATTCAAAAGGCATTAACGGCTTTGAAGATAAGCCGTAGCGGGAGTGTTAGCCCGACTCAAAGGTCGTCTCATTCAATAATAGATCAATAG 2436 0.406 MLDIESSSFSWESLSSLHHTEHSSSNEHSEDEMNKPLEVTVNSGGVVFFAFFNGQGSADAFPREEAAVIKISSSRMATQSERLGYELAKWLGIQTPQARVIHNTSSEWQQIKEATEKAREAAANSQCDEVGEVTCFELLEALELSRCLFLMSYVHGSPLLENTSAFESRESAEITSEALGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLAEKMISANTNTLEAALDSAMNIYRPKVVRALQKERRSSSVDSRLDSHNPGLIISQASDLSEATASPISADISLKSEASEESISSDLNIVVIDSGVPRRPPIGKRANDQVNYPKLVELLINSSEYASNLLHDITGGKLGCPLPENMDTTDIPTSHMRSVHAFRTGFRGALRDLQGFHIFLLTLHQRLDTLLRSFMNIISKISSGESDREDLLVPDSPSLSLASSGSCCSPSSKERHANDNNQDFADSESQRSTSRSLSSCNRDCSDSTSGSKENWHGKFSKGNGESHRNLRLTAKLRDFHKFAKVDAESSKELEQWNEMLKNDAVKLCQENNFNTGFFEGSDNNSVVDAYELKVRLEHILERIALISDAASTEKPSAVTSFLFIGGALAARSVYTLQYLGITHILCLCTNEIGQSETQFPDVFEYQNFSVCDSEDFNITTVFDEACDFIDSVEQKGQKILVHCFEGKSRSVTLVLAYLMLRKKYTLSKAWQTMKQVHRRAQPNDGFAKILQVLDQKLHGKVSMEWQQRKPTMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRSGSVSPTQRSSHSIIDQ 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05739 811 Gene3D - 6 145 - -
Vivi5g05739 811 Pfam Actin-fragmin kinase, catalytic 3 270 IPR015275 -
Vivi5g05739 811 SMART dsp_5 584 726 IPR020422 GO:0006470|GO:0008138
Vivi5g05739 811 Gene3D - 158 289 IPR036940 -
Vivi5g05739 811 MobiDBLite consensus disorder prediction 427 445 - -
Vivi5g05739 811 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 810 IPR035010 GO:0004721|GO:0009737|GO:0043622
Vivi5g05739 811 CDD DSP 585 721 - -
Vivi5g05739 811 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 584 729 IPR029021 -
Vivi5g05739 811 ProSiteProfiles Dual specificity protein phosphatase domain profile. 584 729 IPR020422 GO:0006470|GO:0008138
Vivi5g05739 811 MobiDBLite consensus disorder prediction 416 495 - -
Vivi5g05739 811 SUPERFAMILY Protein kinase-like (PK-like) 2 319 IPR011009 -
Vivi5g05739 811 MobiDBLite consensus disorder prediction 453 486 - -
Vivi5g05739 811 Gene3D Protein tyrosine phosphatase superfamily 567 739 IPR029021 -
Vivi5g05739 811 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 653 705 IPR000387 GO:0016311|GO:0016791
Vivi5g05739 811 FunFam Dual specificity protein phosphatase PHS1 556 730 - -
Vivi5g05739 811 Pfam Dual specificity phosphatase, catalytic domain 600 721 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05739 Vivi-Chr5 161052511 161057680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05739 2 793 Protein tyrosine phosphatase (PTP) family AT5G23720 65.119 0.0 1015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05739 K14165 - gmx:100799468 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05739 5 161052511 161057680 Vivi5g05739 5 161052511 161057680 ECH