Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05738 ATGGCAACACATCAAAACCAGGGAAAAGATCAAGAGAGGGAATTGGAATTCCTAAGTGACGACTCTGAATCTGAATTTGAGGTTCCATTGCCTCTCACCGTCACTTCTCGGGCTTTGTATATGTTGGGAGATATAACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCATTTGGTTCGTAAACGCACTTCCAAGTATCGCTCTTCTGGTTTCCCTCATAGTCCTTCAACCACCATGCCTTCTAATTCTAGCGTCCGAGACTCGATTGATGATAAAAAATGTGATATGCACCTTGATCAAACAGAAATTAGCTTGTGGGAGAGACTTGGGAAAGCTGCAATGTTGGATATTGAATCGAGCTCCTTTTCTTGGGAGAGTCTCTCTTCACTGCACCATACTGAACACAGCAGTAGCAATGAGCATTCTGAGGATGAAATGAACAAGCCTCTTGAGGTAACCGTGAATTCTGGAGGTGTTGTATTTTTTGCCTTTTTCAATGGTCAAGGGAGTGCTGATGCTTTTCCGAGAGAGGAAGCAGCTGTTATAAAAATATCATCATCAAGAATGGCAACCCAATCTGAACGCCTTGGATATGAACTTGCTAAGTGGCTAGGAATCCAAACTCCGCAGGCTAGAGTCATTCATAATACCAGTTCAGAATGGCAACAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCGGCGGCAAATTCTCAGTGTGATGAAGTAGGTGAAGTGACGTGTTTTGAACTTTTGGAAGCTCTAGAGCTTAGCCGATGTCTATTTTTAATGAGTTATGTACATGGTTCACCTTTGCTTGAGAACACTAGTGCATTTGAGTCACGAGAATCTGCAGAAATAACATCAGAAGCTCTTGGCAGGGTACTGATGTTAGACCTAGTAATTCGAAATGAAGACAGGCTCCCTTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAACTTGCTGTTGGCTGAAAAGATGATCTCTGCAAATACAAATACACTAGAAGCAGCTTTGGATTCTGCAATGAATATTTATAGACCAAAGGTGGTTAGGGCACTTCAAAAAGAAAGAAGGTCGAGTTCAGTAGATAGCAGATTGGATTCCCATAATCCTGGCTTAATAATATCACAAGCCTCCGATCTTTCAGAAGCAACAGCATCGCCAATATCCGCGGACATAAGTCTTAAAAGTGAAGCATCAGAAGAATCAATATCTTCTGACCTTAACATTGTAGTCATTGATTCTGGTGTTCCTCGGCGACCCCCTATTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTAGTTGAATTGCTAATCAATAGTTCTGAGTATGCATCAAACCTGTTGCATGATATAACTGGAGGGAAATTAGGATGTCCTCTACCAGAAAACATGGATACAACTGATATACCTACAAGTCACATGAGATCAGTTCATGCCTTTCGTACCGGTTTTCGAGGTGCACTTAGGGATCTACAAGGATTTCATATATTCCTACTCACCCTACATCAAAGACTTGATACTTTGTTACGATCATTTATGAATATTATAAGCAAAATATCATCAGGGGAGTCTGACAGAGAGGACTTGTTGGTTCCTGATTCACCTTCCCTTTCACTGGCTAGTAGTGGTAGTTGTTGCTCTCCATCAAGTAAAGAGAGGCATGCCAATGATAACAATCAAGATTTCGCTGATTCAGAATCACAGAGATCTACTTCAAGGTCACTGTCTTCATGTAATAGAGATTGTAGTGACTCGACTTCTGGGTCCAAAGAAAATTGGCATGGGAAGTTCTCTAAAGGAAATGGAGAGTCACATCGTAATCTCCGTTTGACAGCTAAGCTCCGTGATTTTCATAAATTTGCCAAGGTTGATGCTGAATCTAGTAAAGAACTGGAACAGTGGAACGAAATGCTTAAAAATGATGCCGTCAAACTATGCCAGGAGAACAATTTCAATACAGGATTCTTCGAGGGTAGTGATAATAACAGTGTTGTTGATGCATATGAACTGAAGGTCCGACTTGAGCATATTCTAGAGAGAATTGCATTGATATCTGATGCTGCAAGTACCGAGAAACCGTCTGCTGTTACAAGCTTTCTGTTCATTGGTGGGGCACTGGCTGCAAGATCTGTATACACTCTGCAATACTTAGGAATTACACATATTTTGTGTTTGTGTACCAATGAAATTGGACAATCCGAAACTCAATTTCCTGATGTATTTGAATACCAAAATTTCTCTGTCTGTGACAGTGAAGATTTTAACATCACCACCGTATTTGATGAAGCATGTGATTTCATAGATTCTGTTGAACAAAAAGGTCAGAAAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGTGTTACATTGGTCCTTGCTTATCTAATGCTGAGGAAGAAGTATACTTTATCAAAAGCATGGCAAACAATGAAACAGGTTCACCGTCGAGCACAGCCAAATGATGGTTTCGCAAAGATCTTACAAGTTTTGGATCAGAAATTACATGGGAAGGTTTCAATGGAGTGGCAACAGAGGAAACCGACAATGAAAGTCTGTCCCATCTGTGGGAAAAATGCCGGGCTAAGCAGTAGCTCGCTAAAACTACACCTGCAGAAATCACATAGAAAGCTATCATCTGGTAGTGTAGATAGTGCCATGACAATGGAGATTCAAAAGGCATTAACGGCTTTGAAGATAAGCCGTAGCGGGAGTGTTAGCCCGACTCAAAGGTCGTCTCATTCAATAATAGATCAATAG 2778 0.4111 MATHQNQGKDQERELEFLSDDSESEFEVPLPLTVTSRALYMLGDITAGPAFRFTQWLHLVRKRTSKYRSSGFPHSPSTTMPSNSSVRDSIDDKKCDMHLDQTEISLWERLGKAAMLDIESSSFSWESLSSLHHTEHSSSNEHSEDEMNKPLEVTVNSGGVVFFAFFNGQGSADAFPREEAAVIKISSSRMATQSERLGYELAKWLGIQTPQARVIHNTSSEWQQIKEATEKAREAAANSQCDEVGEVTCFELLEALELSRCLFLMSYVHGSPLLENTSAFESRESAEITSEALGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLAEKMISANTNTLEAALDSAMNIYRPKVVRALQKERRSSSVDSRLDSHNPGLIISQASDLSEATASPISADISLKSEASEESISSDLNIVVIDSGVPRRPPIGKRANDQVNYPKLVELLINSSEYASNLLHDITGGKLGCPLPENMDTTDIPTSHMRSVHAFRTGFRGALRDLQGFHIFLLTLHQRLDTLLRSFMNIISKISSGESDREDLLVPDSPSLSLASSGSCCSPSSKERHANDNNQDFADSESQRSTSRSLSSCNRDCSDSTSGSKENWHGKFSKGNGESHRNLRLTAKLRDFHKFAKVDAESSKELEQWNEMLKNDAVKLCQENNFNTGFFEGSDNNSVVDAYELKVRLEHILERIALISDAASTEKPSAVTSFLFIGGALAARSVYTLQYLGITHILCLCTNEIGQSETQFPDVFEYQNFSVCDSEDFNITTVFDEACDFIDSVEQKGQKILVHCFEGKSRSVTLVLAYLMLRKKYTLSKAWQTMKQVHRRAQPNDGFAKILQVLDQKLHGKVSMEWQQRKPTMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRSGSVSPTQRSSHSIIDQ 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05738 925 MobiDBLite consensus disorder prediction 567 600 - -
Vivi5g05738 925 FunFam Dual specificity protein phosphatase PHS1 670 844 - -
Vivi5g05738 925 Coils Coil 1 21 - -
Vivi5g05738 925 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 18 924 IPR035010 GO:0004721|GO:0009737|GO:0043622
Vivi5g05738 925 MobiDBLite consensus disorder prediction 1 22 - -
Vivi5g05738 925 MobiDBLite consensus disorder prediction 530 609 - -
Vivi5g05738 925 Pfam Actin-fragmin kinase, catalytic 103 384 IPR015275 -
Vivi5g05738 925 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 698 843 IPR029021 -
Vivi5g05738 925 SUPERFAMILY Protein kinase-like (PK-like) 55 433 IPR011009 -
Vivi5g05738 925 Gene3D - 272 403 IPR036940 -
Vivi5g05738 925 Gene3D - 111 243 - -
Vivi5g05738 925 MobiDBLite consensus disorder prediction 541 559 - -
Vivi5g05738 925 CDD DSP 699 835 - -
Vivi5g05738 925 MobiDBLite consensus disorder prediction 68 89 - -
Vivi5g05738 925 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 767 819 IPR000387 GO:0016311|GO:0016791
Vivi5g05738 925 Pfam Dual specificity phosphatase, catalytic domain 714 835 IPR000340 GO:0008138|GO:0016311
Vivi5g05738 925 ProSiteProfiles Dual specificity protein phosphatase domain profile. 698 843 IPR020422 GO:0006470|GO:0008138
Vivi5g05738 925 MobiDBLite consensus disorder prediction 69 86 - -
Vivi5g05738 925 Gene3D Protein tyrosine phosphatase superfamily 681 853 IPR029021 -
Vivi5g05738 925 SMART dsp_5 698 840 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05738 Vivi-Chr5 161052511 161058350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05738 6 907 Protein tyrosine phosphatase (PTP) family AT5G23720 63.727 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05738 K14165 - gmx:100791993 1379.77