Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05730 ATGAATGTAAGTATCTCATTCTTATCTTTCATTCTCATTTCTCAAAGTTTAGGGAAAATGTCAGAGATTGGTGAGCCAAATTCAGAGAAAGTTTGTGAAGGTAGTAGTGCTGAGTCTCCTCCAACTACAGCAGCTGGAAAACAACCAGAAGAAGCTGAACCGAAAACCAGTGAAAGAATCAAAGCAACAAGACATCCTAGATGGACAAGACAGGAGACACTTGTTTTGATTGAGGCAAAGAAGGTGATTGAGAATGGAGATCATGTTTGCAGATACCGATCATCGACGTCAGGGCTGGTTCAAACCGACCCGAAATGGGATTTGGTTTCATCGTTGTGTCAGCAGCATGGTGTCAAAAGGGGGGCTGTTCAGTGTAGGAAGAGATGGGGGAATCTTCTGACTGATTTCAGGAAGATCAAGAAATGGGAGACGAATGCGAAGGACGAGGCTGAGTCGTTTTGGATAATGAGGAATGATGTGAGGAAAGAGAATAAGTTGCCGGGTTTCTTTGATGCTGTTGTGTACAATGTGCTGGATGGAGGAGTTTGCACTGCTGCTGCGTTTCCGCTGTCGCTGGTCAAGATGGCGCCGAGTGGGGAGAATGTTGATCAAGTTGAAGGTGCAGCTGCTGCTGCCGTGTTGGCGTTAGAGCAGGGTAATAAAGAGGATGAAAATGAAGAGGAGGAGGATGAGGCTATTGCTGATAGTGAGAAAATGGGTTGGAGCACAGAGGAGGAAAACATCATGGAGACAAACACAAATGGAAATCTGGTTATGAGTCCATTCAAAACACCAAATCCTAAGAAAACCAATGTAACAGGGAGTTTCAAATTGACACCTCCAACAATCCTACTGCCTAGTTCGGCAGTGAGACAGCAGCAACAGCCATTTCCCCAAGGGAACTTCATTCCAGGTTATCAGAGAGAAGCTATGTTCAATGAGGGGTACAAAAGAAAGCGACCATCACCAGAAAATTCTGAAGACACCGCAGATTTTACTGAAGATGTCATCAAAGTGCTAAGAAGGAATAGCAACATACTGAAAGCCCATCTTGGAGCTCAGAACATCAATACCCAATTGGCCAGAGACCAGCAGAAGCAGCAAACAGACAGCTTAGTTTCAGCCCTTGGCAGGCTTACAGATGCTATCACAAAAATTGCTGACAAGCTGTAA 1173 0.4476 MNVSISFLSFILISQSLGKMSEIGEPNSEKVCEGSSAESPPTTAAGKQPEEAEPKTSERIKATRHPRWTRQETLVLIEAKKVIENGDHVCRYRSSTSGLVQTDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETNAKDEAESFWIMRNDVRKENKLPGFFDAVVYNVLDGGVCTAAAFPLSLVKMAPSGENVDQVEGAAAAAVLALEQGNKEDENEEEEDEAIADSEKMGWSTEEENIMETNTNGNLVMSPFKTPNPKKTNVTGSFKLTPPTILLPSSAVRQQQQPFPQGNFIPGYQREAMFNEGYKRKRPSPENSEDTADFTEDVIKVLRRNSNILKAHLGAQNINTQLARDQQKQQTDSLVSALGRLTDAITKIADKL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05730 390 MobiDBLite consensus disorder prediction 24 61 - -
Vivi5g05730 390 ProSiteProfiles Myb-like domain profile. 67 133 IPR001005 -
Vivi5g05730 390 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 41 390 - -
Vivi5g05730 390 Gene3D - 68 138 - -
Vivi5g05730 390 Pfam Myb/SANT-like DNA-binding domain 66 156 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05730 Vivi-Chr5 160842252 160844955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05730 67 148 Trihelix Transcription Factor Family AT5G03680 33.735 1.07e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05730 - - tpra:123916032 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05730 5 160842252 160844955 Vivi5g05730 5 160842252 160844955 ECH