Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05699 ATGCAGGAAGATTGGAAGCCAATGATTGGTATGGTTTTCGATAGCATCGAAGATGCTTGGAAGTTCTGGGTTGATTATGGTGGAAAAATTGGATTTAGAGTGAGGAAACAATATTCACACAAGAAAAAAGATGGCTCAATTAGTTCTTCTAGGTTTGTTTGTTGCAAGGAAGGTTTGCGAAAGCCAGATAAGCGAGATTATAAAATAATCAATCCAAGACCTGAGACAAGAACAAGTTGTCCAGCTAGGATAGGGTTTAAGGATATGGGTGGAAAATTTACCGTCTATGATTTCGTGGAGGAACATAACCACTCGTTACATCCACAAGAAACTCAGTATATGTTGTCGTCTGAACAAAAGGTTTCGGAAGTTCAATGCCATCAAATTGAACTAGCAGATGAAAATGGTCTACAACAAAGTGTGTTACTTGATTTGACGAGTAAAAAGGTGGGTGGTAGTACTAGTAGTGACTGTGGATATGCTCTTTCGGATCAAAAGAATAATATCCGAAAAAGAAGGAAGATGAGTTTGGTGAATGGAGAAGTCAATTATCTCTTGCAATACTTTCAAAGAAAGTTGGTTGAAAATCCAACTTCCTACCATGCCTATCAAATAGATGATGAAAATAAAATCACCAATGTGTTTTGGGCGGATGCAGGAATGCTAGTTGATTATGGCTATTTTGGTGATGTGGTTTTTCTTGATTCAACGTATTGCACAGATAGTTCACAGAGACCACTAGTAGTGTTTTCAGGATTTAACCATCATCGAAGAACTGTGATCTTTGGGGCTGCATTGTTATATGATGAAACAAGAAAGTCATACAAGTGGCTATTTGAGAGATTTCTAGAGGCACACAAGCAGAAAATGCCTCAAACGATTTTTACTGCTCAAAACCTAACAATGGAAAAAGCGCTAGTTGTTGTTATGCCTAAGACTTACCATGGCTTATGTACGCGGCGGTTGATTCAGGATGGTATTGAGAACTTAGGAAATTTAATGAAGGATGGGTCTGATTTTCTCATTGACTTTAAGAAGTGCATGTATGACTATGAAGATGAAGAACAATTTGAAAATGGTTGGAAAACCCTCATTGAAAGGTATAATGTTAAGGAAAATACTTGGTTGCAGAGAATGTACACTATGAAGAAGAAATGGGCAGCTTGTTATATGAAGAGCACTTTTACATTAGGAATGCAAAGCACCCAATTTAGTGAAAGTGTGAATGCAAATATTATAAGTTTTATGAAGACAGACTTGGATATAATCAAGTTTTTTGAGCATTTTGAGAACATTGTAGAAGAAAATAGATTTCACGAATTGAAGTGTGAATATGAAGCACGTCTAGAAAACTCAAGACTCAAGTACCCTTATTCTGGACTCTTGCAACATGTGTCTAAGCTTTATGCTCCCACTATTTTTGATCTATTCCAACACGAGTATGAGTTATTTGAAGCATGTTCTGTGAAAAGCAAGAACCTGAACCTGCAAGCATCCACAATTGATTTTGTTATTTCCATGGTAGGGGATATGGGAGAGTGGCGTTTGTCCTTTGATTTGGATAAGACTAAAATAAGTTGCTCGTGTCGTAAGTTTGAGAGCTTTGGTATACTTTGTTGTCATTGTGTAAAAGTCTTTATTCATATGGATGTCAAATCAGTACCCACACGTTATATTTTGAAAAGGTTGACGAAGTTGGCAAGAAGTGGGGCTTCACCTAATGTTGGTGTTAGTCACGGGGTAGAAGATATTGATCTATCCCCAATGCAACGCTACAAGGAAATTTGTCCCCGTCTAATTAGGATAGCCATTGAAGCATGTAGAAGCAAAGAAACATTCACGTTCCTTAGCAAAGTTATTGATGAATTGGATAGGCAAATGTTAGAGCTTCAAAACAATCAAGCAAGTATTTCTCAAGGGAGTCCCTTAGCTAAGGTAAGAGATAGCATGTAG 1953 0.3738 MQEDWKPMIGMVFDSIEDAWKFWVDYGGKIGFRVRKQYSHKKKDGSISSSRFVCCKEGLRKPDKRDYKIINPRPETRTSCPARIGFKDMGGKFTVYDFVEEHNHSLHPQETQYMLSSEQKVSEVQCHQIELADENGLQQSVLLDLTSKKVGGSTSSDCGYALSDQKNNIRKRRKMSLVNGEVNYLLQYFQRKLVENPTSYHAYQIDDENKITNVFWADAGMLVDYGYFGDVVFLDSTYCTDSSQRPLVVFSGFNHHRRTVIFGAALLYDETRKSYKWLFERFLEAHKQKMPQTIFTAQNLTMEKALVVVMPKTYHGLCTRRLIQDGIENLGNLMKDGSDFLIDFKKCMYDYEDEEQFENGWKTLIERYNVKENTWLQRMYTMKKKWAACYMKSTFTLGMQSTQFSESVNANIISFMKTDLDIIKFFEHFENIVEENRFHELKCEYEARLENSRLKYPYSGLLQHVSKLYAPTIFDLFQHEYELFEACSVKSKNLNLQASTIDFVISMVGDMGEWRLSFDLDKTKISCSCRKFESFGILCCHCVKVFIHMDVKSVPTRYILKRLTKLARSGASPNVGVSHGVEDIDLSPMQRYKEICPRLIRIAIEACRSKETFTFLSKVIDELDRQMLELQNNQASISQGSPLAKVRDSM 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05699 650 ProSiteProfiles Zinc finger SWIM-type profile. 514 550 IPR007527 GO:0008270
Vivi5g05699 650 Pfam MULE transposase domain 231 323 IPR018289 -
Vivi5g05699 650 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 624 IPR031052 GO:0006355
Vivi5g05699 650 Pfam SWIM zinc finger 522 548 IPR007527 GO:0008270
Vivi5g05699 650 SMART 26again6 525 552 IPR006564 GO:0008270
Vivi5g05699 650 Coils Coil 613 633 - -
Vivi5g05699 650 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05699 Vivi-Chr5 160465298 160469675 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi5g05699 MULE 2.8e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05699 - - vvo:131603553 1332.78