Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05695 ATGAAGAGAGAACATCATCAAGAACACGAAGAAGCCAGCATGACTGGTAAATCTGAGATTTGCTGGGAAGACGACGGCGGTATGGACGAGCTGTTAGCGGTGGTTGGTTACAAGGTGAAATCATCAGACATGGCTGAAGTTGCTGAAAAGCTTGAACAACTTGAAAAAGCCATGGGTAATTTCCAAGATCAAGATGAAGCCACCATCGCTCAACACCTCTCAAACGACACCGTTCATTACAATCCTGCTGATATTTCTAACTGGCTTCAAACCATGCTTTCCAATGTTGATTCTCAACCGAATCCCTCTGTTTCATCTTCCTCCGATAACGACCTGAACGCCATTCCCGGTAAGGCTATTTACGCCAACACTGATTCGCAAGTAGAGGAGACTCTTCCGTCTCGGAAACGACTCAAACGAGTAGGTTCTTCTTCTGGTGCTGAGTCAACTCGTCCTGTTATGGTGGTTGAAACGCAGGAGAAAGGGATTATTCTTGTTCATACTTTAATGGCCTGCGCTGAAGCTGTTGAACAGAAGAATCTACCTGTGGCGGAAGCGCTGGTGAAACAGATCGGATACCTAGCGGTGTCGCAAGAAGGTGCTATGAGAAAAGTTGCTACGTATTTCGCTGAAGGTTTGGCTCGGAGAATCTACGATGTGTTTCCACAGCATTCCGTTTCCGATTCGCTTCAGATCCATTTCTATGAGACTTGTCCTTATCTGAAGTTCGCGCACTTCACTGCGAATCAAGCTATTCTTGAAGCTTTTCAAGGAAAATCGCGTGTTCATGTTATTGATTTCTCGATCAATCAAGGGATGCAGTGGCCGGCGCTTATGCAGGCGCTTGCCTTGCGTCCTGGCGGTCCTCCTGCTTTTCGTCTCACCGGAATCGGTCCTCCGGCGTCGGATAACTCCGATCATCTTCAGCAGGTTGGTTGGAGGCTTGCGCAGTTTGCGCAGACGATTCATGTTCAGTTTGAATATCGTGGTTTTGTTGCTAATAGTCTCGCTGATCTTGATGCTTCCATGCTTGAACTCCGGTCACCGGAGACTGAATCCGTTGCTGTTAACTCTGTTTTTGAGCTTCATAAACTCAACGCGCGCCCTGGTGCGCTTGAGAAGGTGTTTTCTGTTATCCGTCAGATTCGGCCGGAGATTGTCACCGTCGTGGAGCAAGAAGCGAATCACAACGGACCGGCTTTTCTCGACCGGTTCACCGAGTCGCTTCACTACTACTCGACGCTTTTTGACTCGCTGGAGAGTTCATTGGTTGAACAGCAGGATAAGGCTATGTCGGAGGTTTATCTAGGGAAGCAAATCTGCAACGTGGTGGCGTGTGAAGGAACGGACCGAGTCGAGCGTCACGAGACATTGAATCAGTGGAGGAACCGGTTCGGTTCAGCTGGGTTTTCTCCGGTTCATTTGGGATCCAACGCGTTCAAGCAAGCGAGTATGTTGTTAGCGCTTTTCGCTGGTGGAGATGGTTACAAGGTGGAAGAGAATGACGGTTGTCTCATGTTGGGATGGCACACTAGGCCATTGATTGCAACCTCTGCTTGGAAACTCGCCGCCAACTCAATGGTGGTTTCACACTGA 1596 0.4875 MKREHHQEHEEASMTGKSEICWEDDGGMDELLAVVGYKVKSSDMAEVAEKLEQLEKAMGNFQDQDEATIAQHLSNDTVHYNPADISNWLQTMLSNVDSQPNPSVSSSSDNDLNAIPGKAIYANTDSQVEETLPSRKRLKRVGSSSGAESTRPVMVVETQEKGIILVHTLMACAEAVEQKNLPVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYDVFPQHSVSDSLQIHFYETCPYLKFAHFTANQAILEAFQGKSRVHVIDFSINQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDHLQQVGWRLAQFAQTIHVQFEYRGFVANSLADLDASMLELRSPETESVAVNSVFELHKLNARPGALEKVFSVIRQIRPEIVTVVEQEANHNGPAFLDRFTESLHYYSTLFDSLESSLVEQQDKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRNRFGSAGFSPVHLGSNAFKQASMLLALFAGGDGYKVEENDGCLMLGWHTRPLIATSAWKLAANSMVVSH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05695 531 SMART DELLA_2 29 106 - -
Vivi5g05695 531 MobiDBLite consensus disorder prediction 1 21 - -
Vivi5g05695 531 FunFam DELLA protein GAI 27 96 - -
Vivi5g05695 531 Gene3D - 27 96 IPR038088 -
Vivi5g05695 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 517 IPR005202 -
Vivi5g05695 531 ProSiteProfiles GRAS family profile. 156 521 IPR005202 -
Vivi5g05695 531 Coils Coil 37 64 - -
Vivi5g05695 531 Pfam Transcriptional regulator DELLA protein N terminal 29 100 IPR021914 -
Vivi5g05695 531 Pfam GRAS domain family 165 521 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05695 Vivi-Chr5 160412338 160414534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05695 23 525 GRAS Transcription Factor Family AT1G14920 69.392 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi5g05695 GRAS 3.7e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05695 K14494 - gmx:547718 771.541