Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05618 ATGGAAATGGAATTTCTTTCTAAAGAACTCGTTAAACCTTCGTCACCAACTCCTTCTCACCTCCGTATGTATCCACTTTCTTTCATAGACAACATAGTTTTTCATAAGTATGTGCCTGTAATTTTCTTTTACAATCCAAACCAGAATACCGACCAAAATTCTAAAATATCACAACTTCGAAAATCCTTATCTCATACTCTATCCAAATACTATCATTTTGCCGGCAGGCTGAATGATAAAACTATCATCGAATGTAATGATCTAGGTGTGTCATTTCTAGTTGCAAAGACAAAAAACAAACTATCATGTATCCTTCAAAATCCCACAGAAATATTGCTAAACCCTTTGTTTCCCGACGAATTACAATGGAAAGACATGGATTGGAGCGCGTCACTAATATTCATTCAAATCAATTGTTTTGCCTGTGGAGGAATCGCGATAAGTATTTGCATGAGTCACAAAATTGGCGATGCTTCCACTCTTTTCAACTTCATGAATGATTGGGCCATCATCAACCAAAAAGTAGAACAAGATGAAAGGTTAGGGTTAGGGTTATCAGTATTACCCTCTCCGTTACTTGATGGAGGAGCTTCAGTTTTTCCTCAGAGAGATATACCTATTTTCCCAGAAATTGAGTTTGTGAAAGACAACAAAGTTGTGAGTAAAAGGTTTTTGTTTGAAGCCTCAAAGATCAACTCCCTCAAGGAAATGGTAAGAAATTCTGTTGGTTTTTCTCTCACACGCGTACAAGTTGTTACTGCATTGATTTACAAACGCGCGGTTTTAACAAGCGGATTAAATTTCAAGACAGCATCGTTCAACATGGTTGTGGATCTTCGCAAACGAATGGTTCCTCCGTTGTCTGATAAGCGCATAGGAAACTTTGCTTGGTTCTTTGGTTTGTCCATAGATAAGGAGAAAATGGAGTTACAGGATTTAGTATTCAAAATTAAAGAAGGATTATCTGAATTTTGTGATGTTATTCTGGAAAATTTTGGAGGAAAAGAGAAGCACAAATTTTCATTAATTTATGAGAGATCGAAAAATCTTAATGAGACAGCTCATACTGAAGATAATGATTTGTTTTTATTCAGTAGTTGGTGTCGGTTTGGAATGTATAAAGTAAATTTTGGGTGGGGAAAACCAGCATGGGTGACCACCTTTTGTTGCTCTATGAGGAATATAATATTTCTGATGGAAACAAAAGATGGGAATGGGATTGAAGCAATTGTGAACTTGGAAGAGAAGAATATGGCTAAGTTTGAGAATGATGTTGAGCTTCTTCAGTATGCTTCTCTGAATCCAAGTATTGTTTGA 1317 0.3629 MEMEFLSKELVKPSSPTPSHLRMYPLSFIDNIVFHKYVPVIFFYNPNQNTDQNSKISQLRKSLSHTLSKYYHFAGRLNDKTIIECNDLGVSFLVAKTKNKLSCILQNPTEILLNPLFPDELQWKDMDWSASLIFIQINCFACGGIAISICMSHKIGDASTLFNFMNDWAIINQKVEQDERLGLGLSVLPSPLLDGGASVFPQRDIPIFPEIEFVKDNKVVSKRFLFEASKINSLKEMVRNSVGFSLTRVQVVTALIYKRAVLTSGLNFKTASFNMVVDLRKRMVPPLSDKRIGNFAWFFGLSIDKEKMELQDLVFKIKEGLSEFCDVILENFGGKEKHKFSLIYERSKNLNETAHTEDNDLFLFSSWCRFGMYKVNFGWGKPAWVTTFCCSMRNIIFLMETKDGNGIEAIVNLEEKNMAKFENDVELLQYASLNPSIV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05618 438 Gene3D - 216 432 IPR023213 -
Vivi5g05618 438 PANTHER F21J9.9 4 432 - -
Vivi5g05618 438 Gene3D - 1 207 IPR023213 -
Vivi5g05618 438 Pfam Transferase family 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05618 Vivi-Chr5 159358383 159359993 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05618 1 422 Monolignol Biosynthesis Gene Families AT5G48930 23.333 1.74e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05618 - - vvo:131607968 568.155