Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05453 ATGAATCTTAATATAACTGCAAATAGTAGCATATTCATAATACTTATTCCTCATAATGATACAAACATCAATGTTTGTTCTGCTGCTCCACCAAATATTGTTTCAGATGGAATTTGGGGTGGACAAGACAATGGAAGGGTTCCACTTAGGTCTGCACTTCCTATCTTTGAGTTGCAAGTTGTTGTCATTTTCATTATCACACAAATCTGCAACTTCTTCCTAAGACGTTTGCATTTTCCCGAATTTATCGGTCAAATGATGGCTGGCTTAATTCTTGGACCTTCAATTCCGAGTCGGCAATTGGACAAATTTAAGAACATATTGTTTCCATATGGAAGTCAAGATATACTTGCATCAATATCATCAATTGGTTATGCACTTTTCATCTTCATCACTGCTGTGCAAATGGATTTGAGCATGGTGACAAGGACAGGTCACAAGGCTTGGACTTTCGCGGTAGTGGGATTGGCCGTGCCTTTAACCATAAGTTTTTCGGTTCAATCCTCCATGAGTTCATTAACAATTAAATATCTCGAAGACTTGCATGAAGATATTCCTTTTGTGGTTTTATCGCATACTATGATTTCGTTTGCAGTCGTTGCTTCTCTACTCAACGAGCTTAAAATCCTTAACTCCGAACTCGGGAGATTAGCGTTATCGTCGGTGTTGGTGGGCGACATACTAGGAACATCAATCGGATGCCTATCTAATATCATAATGTTACAACATGGGATAGAAAAGAGGATAATATTTGGTATGACGGGGATCGCTTTTGCTCTCTTTGTTCCGTTGATTTTCCGGCCGTTAATGTTTTTGATCATCAAAAATACAAAAGAAGGAAGACCTGTGGATGATGGTTATACCTATATCATCATTGTGCTTGTATGTGGTTTAGGTTGGCTTTCGGTTTACGTAGGCCAAGATTTTATACTTGGTGCATTTGTTTTAGGGTTGGCTGTGCCAGAAGGACCTCCATTAGGAGCTGCATTGGTGAAGAAGCTTCAATTCTTTTGTTCAAGTTTATTTCTGCCTATATTTGTGACCTGTGGTGTGATGAAAGTAGATTTGTCTTTGCCACGTACAGGAAGAGCTTTTGTTGGTATTGGGAGCTTTGTTTTCCTTACACACTTAATCAAAATGATAGCTTATGTTATACCTGCACTTCTTTGCAAAATCCCTTTGAAAGATGCTTTGGCTCTTTCCCTCATTTTGAATGCCAAAGGAACTGTGGATGTTGGTATATTTTCTGGCTTATATGATGATAAGCTTTTTTCTGGACAAACTTATGGAGTGATGATAGTCAGCATAATGATCATATCATGCATAATAAAATGGTCACTCAAGATATTGTATGATCCATCCAGAAAATATGCTGGATATCAGAGAAGGACAATCATGAGCTTAAAACCGGAGGCGGAATTGAGAATACTTGCTTGCATTCACAAACAATATAATATACCGGCTATAACAGATGTTCTTGATATTTGTTCGCCAACAACAGAAAAACCTATCATTGTTGATGCATTGCATCTTATTGAGTTAGTTGGAAGGACATCCCCTATTTTCATCTCGCATCGGCTTCAAAAAACGGTTTCGTGTTCTCATAAGTCTTACTCGGACGATCTCATTCTGGCTTTGGATCTCTATGAACATGAAAACTATGGTGGAGTAACTTCACACACTTTCACAGCCATATCTCCGCCGTCACTTATGCATGAAGATGTTTGTCAACTTGCATTGGACAAAGTTGCATCCATCATAATTCTTCCATTCCATAGAAGATGGACTACTGATGGCACAGTTGAATCCGATGACAAGAATATAAGGGCTTTAAATTGCAAGGTACTCGAAATAGCTCCATGTACAATAGGAATCCTAGTGACTCGTTCTTTGTTACAAAACAACATGTCCATTAAGTTAGCCATGGTTTTTCTTGGTGGAAGAGACGACAGAGAGGCTTTGTGCTTAGTGAAAAGAGCGATAAGAAACACTAGGATTCGTTTGGTTGTGTTCCACCTTGCAGTGGAACAACACATGCCAAACTTGGAGAATCTACTAGATAATGAGGCACTAGATGAAATAAAGAAAATAACACATTATGGCCAGGAAAATGTTCGTTATCAAAAAGTGACTGTAAACGATGGTCCAGCGACATCTGCTATTCTTCGTGATATAGCGAATGAACATGATTTTTTTATTGTTGGGAGAACACATGACTCGGATTTACCTCAGACAGAAGGACTTACAAACTGGAGTGAGTTTTCAGAGTTAGGTGTCATTGGAGATTTGCTTGCTTCACCAGATTTTGAGAGCAGAGCTGGTGTTTTGGTAGTGCAGCAACAAGTCAAAGACAAATAG 2358 0.388 MNLNITANSSIFIILIPHNDTNINVCSAAPPNIVSDGIWGGQDNGRVPLRSALPIFELQVVVIFIITQICNFFLRRLHFPEFIGQMMAGLILGPSIPSRQLDKFKNILFPYGSQDILASISSIGYALFIFITAVQMDLSMVTRTGHKAWTFAVVGLAVPLTISFSVQSSMSSLTIKYLEDLHEDIPFVVLSHTMISFAVVASLLNELKILNSELGRLALSSVLVGDILGTSIGCLSNIIMLQHGIEKRIIFGMTGIAFALFVPLIFRPLMFLIIKNTKEGRPVDDGYTYIIIVLVCGLGWLSVYVGQDFILGAFVLGLAVPEGPPLGAALVKKLQFFCSSLFLPIFVTCGVMKVDLSLPRTGRAFVGIGSFVFLTHLIKMIAYVIPALLCKIPLKDALALSLILNAKGTVDVGIFSGLYDDKLFSGQTYGVMIVSIMIISCIIKWSLKILYDPSRKYAGYQRRTIMSLKPEAELRILACIHKQYNIPAITDVLDICSPTTEKPIIVDALHLIELVGRTSPIFISHRLQKTVSCSHKSYSDDLILALDLYEHENYGGVTSHTFTAISPPSLMHEDVCQLALDKVASIIILPFHRRWTTDGTVESDDKNIRALNCKVLEIAPCTIGILVTRSLLQNNMSIKLAMVFLGGRDDREALCLVKRAIRNTRIRLVVFHLAVEQHMPNLENLLDNEALDEIKKITHYGQENVRYQKVTVNDGPATSAILRDIANEHDFFIVGRTHDSDLPQTEGLTNWSEFSELGVIGDLLASPDFESRAGVLVVQQQVKDK 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05453 785 Gene3D - 56 458 IPR038770 -
Vivi5g05453 785 PANTHER CATION/H + ANTIPORTER 33 782 - -
Vivi5g05453 785 Pfam Sodium/hydrogen exchanger family 61 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05453 Vivi-Chr5 157603419 157606194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05453 19 778 Antiporter Super Family AT3G44900 36.207 1.03e-156 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05453 K26731 - gmx:100797995 962.6