Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05395 ATGGCAGGAGTAGCAGCTCTCAAGAAGAACATCTCATTCAACAAGAAAGACAATTCAAATCTTCTATTGGGTCGTTTCGAGCTAGGAAAACTCCTAGGCCATGGAACTTTTGCCAAGGTCCACCTAGCCAAAAACCTCAAAACAGGTGAAGCAGTAGCTATAAAGATCATAAGCAAAGACAAAATCCTTAAAAGTGGTTTGGTTTCACACATCAAACGTGAAATCTCCATTCTCCGCCGTGTCCGCCACCCCAACATCGTGCAACTCTTTGAAGTCATGGCCACAAAGACAAAGATCTACTTTGTGATGGAATATGTACGAGGTGGAGAGCTTTTCAATAAGGTTGCTAAAGGTAGGTTGAAAGAAGAGGTTGCAAGGAAGTATTTTCAACAGTTGATATGTGCGGTTGGGTTTTGTCATGCTAGAGGTGTTTTTCATAGAGATATAAAGCCTGAGAATTTGTTGCTTGATGAAAATGGTAACCTTAAAGTTTCAGATTTTGGATTGAGTGCTGTGTCGGATGAAATTAAGCAAGATGGGTTGTTTCATACTTTTTGTGGTACACCTGCTTATGTTGCTCCTGAGGTTTTGTCTAGAAAAGGTTATGATGGTGCTAAGGTTGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTGCCTTTTCATGATCCTAATAATGTTATGGTTATGTATAAGAAGATTTATAAAGGTGAGTTTAGGTGTCCTAGATGGTTTTCTCCTGAGCTTGTTAACCTTCTTACTAGGCTTCTTGATATTAAACCTCAAACTAGGATTTCGATTCCCGAGATTATGGAGAATCGTTGGTTTAAGATAGGTTTTAAGCATATAAAGTTTTATGTTGAGGATGATGTTGTTTGTAATCTTGATTCTCTTGATCTTGATGGAAATGAAGGTAATGATGGTAAAGATGATAAGAAGGTGCTAAACATCGATGAGCATCGTGATGAAGTATTGGAATCGGTATCAGAATCAGAATGGGATTCCGAGGTTGTGAATAGAAGAAAGAATCGTCAGCTTGGTTCGTTGCCAAGGCCTGCGAGTTTGAATGCTTTTGACATTATATCGTTTTCGCAAGGCTTTGATCTTTCTGGATTGTTTGAGGAAAAGGGCGATGAAGCAAGGTTTGTATCTGGTGCATCGGTGTCAAAGATTATGACAAAATTGGAGGAAGTAGCTCAGTTGGTTAGTTTCAAAGTGAGGAAGAAAGATTACAGGGTTAGCTTGGAGGGTTCGAGAGAAGGGGTAAAAGGGCCATTGAGTATCGCTGCTGAGGTATTCGAGTTAACACCTTCTTTGGTTGTTGTCGAGGTGAAGAAAAAAGGAGGGGATAAAGATGAGTATCATAGTTTTTTAAACACTGAATTGAAGCCGGCTTTGCATAGTTTAACCATGGAGGAATCTGCAGGTTCTTCTTCATGTCAAACTACTCCAGATGAATCTTTGCAACAACGCGCATTTTCTGATTCTGCCATCGACAAACATTCAGATAGTATTGAATCTCTGAACCTAGATACCTGA 1554 0.3945 MAGVAALKKNISFNKKDNSNLLLGRFELGKLLGHGTFAKVHLAKNLKTGEAVAIKIISKDKILKSGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLICAVGFCHARGVFHRDIKPENLLLDENGNLKVSDFGLSAVSDEIKQDGLFHTFCGTPAYVAPEVLSRKGYDGAKVDIWSCGVVLFVLMAGYLPFHDPNNVMVMYKKIYKGEFRCPRWFSPELVNLLTRLLDIKPQTRISIPEIMENRWFKIGFKHIKFYVEDDVVCNLDSLDLDGNEGNDGKDDKKVLNIDEHRDEVLESVSESEWDSEVVNRRKNRQLGSLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSGASVSKIMTKLEEVAQLVSFKVRKKDYRVSLEGSREGVKGPLSIAAEVFELTPSLVVVEVKKKGGDKDEYHSFLNTELKPALHSLTMEESAGSSSCQTTPDESLQQRAFSDSAIDKHSDSIESLNLDT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05395 517 Pfam NAF domain 357 413 IPR004041 GO:0007165
Vivi5g05395 517 Gene3D Transferase(Phosphotransferase) domain 1 16 343 - -
Vivi5g05395 517 CDD CIPK_C 361 471 - -
Vivi5g05395 517 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05395 517 MobiDBLite consensus disorder prediction 501 517 - -
Vivi5g05395 517 MobiDBLite consensus disorder prediction 476 500 - -
Vivi5g05395 517 FunFam Non-specific serine/threonine protein kinase 16 329 - -
Vivi5g05395 517 MobiDBLite consensus disorder prediction 474 517 - -
Vivi5g05395 517 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Vivi5g05395 517 CDD STKc_SnRK3 25 280 - -
Vivi5g05395 517 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05395 517 Gene3D Kinase associated domain 1, KA1 355 476 - -
Vivi5g05395 517 FunFam Non-specific serine/threonine protein kinase 357 475 - -
Vivi5g05395 517 SUPERFAMILY Protein kinase-like (PK-like) 22 282 IPR011009 -
Vivi5g05395 517 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 466 - -
Vivi5g05395 517 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05395 517 ProSiteProfiles NAF domain profile. 355 379 IPR018451 GO:0007165
Vivi5g05395 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Vivi5g05395 517 FunFam Non-specific serine/threonine protein kinase 17 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05395 Vivi-Chr5 156420685 156422553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05395 21 492 CBL-interacting serine-threonine protein kinases AT4G18700 72.304 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi5g05395 Pkinase 7.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05395 - - gmx:100807567 726.472