Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05358 ATGATGGAAAACCAAGATGTGAAGCTGCTTAACTTTTTATTGAGTCCAGTTGGTAGAAGAGTTGAATGGGCTCTAAAGCTCAAAGGTGTTGATTATGAGTATATAGAAGAAGATATCTTCAACAAAAGCAATCTCCTTTTGGAATTGAACCCGGTTCATAAAAAAGTTCCGGTTCTTGTTCATGGCAAGAAATCAATTGCAGAGTCATTGGTTATTCTTGAATACATTGATGAAACATGGAAGCAATGTCCTTTGATGCCCCTCCATCCTTATGAAAGATCTCGTGCTCGATTTTGGGCTAAGTTATCGGATGAGAAGCTTGTGTGGGCTTCATGGAAAGCAATGGTAAGGAAAGGGGAAGAAGGGGAAAGGGCCCTAGAGGAAGCAAAAGAAGTAATGGAGAAGTTTGAAGAGGAGATAAATGGAAAGAAATTCTTTGGAGGGAACAATATTGGGTATCTTGATCTTGCTCTTGGATGGATCACTTGTTGGCTTCCAATTTGGGAGGAAATTGGGGCAATGCAGGTACTTGACCCATTAAAATGTCCATCCATCTCTTCATGGAAGATCAACTTTCTGAATCATCCTATCATTAAAAACAACTTGCCACCAAAGGATAAAATGATTGTATATTATCGTCGTTACATAGAATAG 654 0.3899 MMENQDVKLLNFLLSPVGRRVEWALKLKGVDYEYIEEDIFNKSNLLLELNPVHKKVPVLVHGKKSIAESLVILEYIDETWKQCPLMPLHPYERSRARFWAKLSDEKLVWASWKAMVRKGEEGERALEEAKEVMEKFEEEINGKKFFGGNNIGYLDLALGWITCWLPIWEEIGAMQVLDPLKCPSISSWKINFLNHPIIKNNLPPKDKMIVYYRRYIE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05358 217 Gene3D Glutaredoxin 1 85 - -
Vivi5g05358 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Vivi5g05358 217 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Vivi5g05358 217 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Vivi5g05358 217 FunFam Tau class glutathione S-transferase 86 217 - -
Vivi5g05358 217 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Vivi5g05358 217 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Vivi5g05358 217 SUPERFAMILY GST C-terminal domain-like 78 216 IPR036282 -
Vivi5g05358 217 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Vivi5g05358 217 Coils Coil 119 139 - -
Vivi5g05358 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Vivi5g05358 217 FunFam Tau class glutathione S-transferase 1 88 - -
Vivi5g05358 217 Gene3D - 86 217 - -
Vivi5g05358 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 212 IPR010987 -
Vivi5g05358 217 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05358 Vivi-Chr5 155764422 155765752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05358 4 217 Glutathione S-transferase Gene Family AT2G29420 45.794 5.07e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05358 K00799 - tpra:123914566 317.005