Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05357 ATGGGAAATCAAGATGTGAAGGTGCTCAACTTTTTATTGAGTCCAGTTGGTAGAAGAGTTGAATGGGCTCTAAAGCTCAAAGGTGTTGATTATGAGTATATAGAAGAAGATATCTTCAACAAAAGCAATCTCCTTTTGGAATTGAACCCGGTTCATAAAAAAGTTCCGGTTCTTGTTCATGGCAAGAAATCAATTGCAGAGTCATTGATTATTCTTGAATACATTGATGAAACATGGAAGCAATATCCGTTGCTGTCTCGTCATCCTTATGAAAGATCTCGTGCTCGATTTTGGGCTAAGTTATCTGATGAGAAGCTTGCGTTAGGTTCATGGAGAGCAATGGTGAGAAAAGGAGAAGAAGGAGAGAAGTATTTAAAGGAAGCAAAAGAAGTAATGGAGAAATTAGAAGAGGAGATAAATGGGAAGAAATTCTTTGGAGGGAACAATATTGGGTATCTTGATCTTGCTCTTGGATGGATCACTTGTTGGCTTCCAATATGGGAGGAAATTGGGTCAATGCAGGTACTTAACCCATTAAAATGTCCATCCATCTCTTCATGGAAGATCAATTTTCTGAATCATCTTGCCATTAAAGACAACTTGCCACCAAAGGATAAAATGATTGCTTATTGTCATCGTCGCATAGAGGAGTTTTCTTCAACTTGTCATGGTTAA 675 0.3793 MGNQDVKVLNFLLSPVGRRVEWALKLKGVDYEYIEEDIFNKSNLLLELNPVHKKVPVLVHGKKSIAESLIILEYIDETWKQYPLLSRHPYERSRARFWAKLSDEKLALGSWRAMVRKGEEGEKYLKEAKEVMEKLEEEINGKKFFGGNNIGYLDLALGWITCWLPIWEEIGSMQVLNPLKCPSISSWKINFLNHLAIKDNLPPKDKMIAYCHRRIEEFSSTCHG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05357 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vivi5g05357 224 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Vivi5g05357 224 Gene3D - 85 221 - -
Vivi5g05357 224 FunFam Tau class glutathione S-transferase 1 87 - -
Vivi5g05357 224 FunFam Tau class glutathione S-transferase 85 221 - -
Vivi5g05357 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Vivi5g05357 224 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vivi5g05357 224 SFLD Main (cytGST) 2 220 - -
Vivi5g05357 224 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Vivi5g05357 224 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Vivi5g05357 224 CDD GST_N_Tau 6 79 - -
Vivi5g05357 224 Gene3D Glutaredoxin 1 84 - -
Vivi5g05357 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Vivi5g05357 224 Coils Coil 118 138 - -
Vivi5g05357 224 SUPERFAMILY Thioredoxin-like 5 85 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05357 Vivi-Chr5 155760008 155762609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05357 3 219 Glutathione S-transferase Gene Family AT2G29420 43.779 1.36e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05357 K00799 - tpra:123914566 319.316