Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05336 ATGGATTTTGTGAAGAAGTGTAAGAGACTGAGAGTATTGAGAAGCAGCAAGAGCATGCATGCAGAGGAAAGTTGCAGCGGAAGCTATTACAAATTATGTTCAGAGACAAGGCACAAAAAGCAAAAAGACAGTCATAAGAAACCACCACATGGTTGTGTTTGTGTCTATGTTGGAGATGAGAGACAGAGATTCATAATCAAGATCAAAATATTCAATCACCCTTTGTTCAAACAATTTTTAGAAGATGTTGAGAATGAATATGGATATGGAAAAGATGGTCCTCTTTGGCTTCCTTGCAACGTTGACATGTTTTGTAAAACACTTGTGGAGATACAAAGTTCTTTTCGAAACAGTGACAATCATAAATAA 369 0.3631 MDFVKKCKRLRVLRSSKSMHAEESCSGSYYKLCSETRHKKQKDSHKKPPHGCVCVYVGDERQRFIIKIKIFNHPLFKQFLEDVENEYGYGKDGPLWLPCNVDMFCKTLVEIQSSFRNSDNHK 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05336 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 108 IPR003676 GO:0009733
Vivi5g05336 122 Pfam Auxin responsive protein 23 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05336 Vivi-Chr5 155524348 155524716 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05336 49 104 Calmodulin-binding Proteins AT4G34750 42.857 5.98e-15 65.1