Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05263 ATGCCATATGGTAATCTTTTTGAAGCACTTGATAGAAATATAAAAGATGAGAAGGTTGCTTGGGATTGGGGTCAGAGGTATAAAATTGCATTGGAAGGTGCAAAAGGGATTTGCTATTTTCATCACGAATGTTCTCAACCTGTTATTCATAGGGATATAAAATCTACCAGCATCTCGCTTGATGAAGATTATGAGTCAAAATTTATTGATTTTGGTGTTTCTGAAAAATCTCAGATGGGTTATAGCTTTTTTGTTGACACACATGGTTATATTGCTCCAGATTAG 285 0.3474 MPYGNLFEALDRNIKDEKVAWDWGQRYKIALEGAKGICYFHHECSQPVIHRDIKSTSISLDEDYESKFIDFGVSEKSQMGYSFFVDTHGYIAPD 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05263 94 Pfam Protein kinase domain 6 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05263 94 SUPERFAMILY Protein kinase-like (PK-like) 1 94 IPR011009 -
Vivi5g05263 94 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Vivi5g05263 94 PANTHER OS01G0750732 PROTEIN 1 93 - -
Vivi5g05263 94 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05263 Vivi-Chr5 154612933 154614710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05263 1 94 Receptor kinase-like Gene Family AT1G72180 55.208 1.16e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi5g05263 Pkinase 4.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05263 - - vvo:131603326 202.986