Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05262 ATGATGATGATAATGATTAAGTTCATAGCTTTACCAACAGTTTTGGCACTTTTTGTTATCTTTGTGCATTTCATGACAAGAATTATCAAACTCAGAAAGCTGAATCTTCCTAAGGGAACCTTAGGATTACCTATCATTGGAGAAACCTTAGAGTTTTTCAAAGCAAATCTTGAGGGGAAACAAATAAGGTTCATACAAGAGAGAATGAAGAAATATAATTCAAGGGTTTTCAAGACATCAATATTTGGAGAGAATATTGCAGTGTTTTGTGGAACAGCAGGGAACAAATTCCTATTCAGCAATGAAAACAAGAATGTTCAAGTGTGGTGGCCTAGTTCAGTTAGGAAGCTGTTAAGGTTGTCTCTTCTTACTAAAGTTGGTGATGATGCAAAGATAACTAGAAGGTTGCTTATGAGTTTTCTTAATCCAGAAACACTCAGAAATTACCTGCCAAAAATGGATAGGATTGCTCAGCATCATATCAACACACATTGGAAAGGGAAGGAACAGGTTGTTGTCCATCCAATAATACGAGTATACACATTTGAATTGGCTTGCTGCTTATTTTTAAGCATGGAAGATCCTATCCAATTATCAAACCTTTCATCATATTTTGAAGAATTTCTCAAAGGGTTGATTGGCTTCTCCATCAATTTTCCTGGAACAAGGTTTCATAAGTCAATGAAAGCTGCAGATGCAATAAAGAAAGAAGTTAAATTGATTATGAAGAAAAGGAAAGTGGATTTGCAAGAAAAGAAAGCTTCACCTACACAAGACCTTCTGTCACATTTACTTGTTACACCTGACACAACTGGAAGGTTTATGAGTGAAGTGGAGATTCTTGATAACATGTTACTACTTGTTTTCGCTGGCCATGACACTTCTAGTTCCGTAATATCATTGGTCATGAAGTATCTCGGAGATTTGCCTGAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCGAAGGAAAAGAGGAAGGAGAGTTATTACAGTGGGAGGATGTTCAAAAAATGAAACACTCTTGGAATTTTACATCTGAAGTTATGAGGCTGTCGCCGCCCGTCGGTGGTGGTTACAGAAATGCTACGAAGGATTTCACCTATGCCGATTGTAACATCCCTATTGATTGGAAGTTGTATTGGAGCACTCATACACACATGGATCCAAAACTGTTTACAAATCCTGAAAAATTTGATGCGTCAAGATTTGAAGGAGAAGGACCAGTACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGGATGTGTTTGGGACAAGAGTTTGCTCGGTTAGAGATACTCGTGTTTATGCATAATATTGTGAAACGTTTCAAGTGGGATTTAGTTAATCCTGATGAGAATTTCAAGTATGATCCTTTGCTAGAACCTGAAAAAGGACTTCCGATTCAACTTCATCCTTCCCATTACACATCATAA 1446 0.3707 MMMIMIKFIALPTVLALFVIFVHFMTRIIKLRKLNLPKGTLGLPIIGETLEFFKANLEGKQIRFIQERMKKYNSRVFKTSIFGENIAVFCGTAGNKFLFSNENKNVQVWWPSSVRKLLRLSLLTKVGDDAKITRRLLMSFLNPETLRNYLPKMDRIAQHHINTHWKGKEQVVVHPIIRVYTFELACCLFLSMEDPIQLSNLSSYFEEFLKGLIGFSINFPGTRFHKSMKAADAIKKEVKLIMKKRKVDLQEKKASPTQDLLSHLLVTPDTTGRFMSEVEILDNMLLLVFAGHDTSSSVISLVMKYLGDLPEVYEQVLKEQLEISEGKEEGELLQWEDVQKMKHSWNFTSEVMRLSPPVGGGYRNATKDFTYADCNIPIDWKLYWSTHTHMDPKLFTNPEKFDASRFEGEGPVPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVNPDENFKYDPLLEPEKGLPIQLHPSHYTS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05262 481 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 FunFam Taxadiene 5-alpha hydroxylase 28 477 - -
Vivi5g05262 481 Pfam Cytochrome P450 37 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 PANTHER CYTOCHROME P450 26 33 462 - -
Vivi5g05262 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Vivi5g05262 481 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 SUPERFAMILY Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 Gene3D Cytochrome P450 25 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05262 481 CDD CYP90-like 68 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05262 Vivi-Chr5 154604413 154607081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05262 35 382 Cytochrome P450 AT5G36110 42.735 5.00e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05262 - - gmx:100778750 727.243