Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05261 ATGAAAGCTGCAGATGAAATAAAGAAAGAAATCAAATTGATTATGAAGAAAAGGAAAGTGGATTTGGAAGAAAAGAAAGCTTCACCTACACAAGACCTTCTATCACACTTACTTGTTACACCTGACACAAGTGGAAGGTTTATGAGTGAAGTGGAGATTCTTGATAACATGTTACTACTTCTTTTCGCCGGCCATGACACTTCCAGATTAGTAATCTCATTGATCATGAAGTATCTCGGAAATTTGCCTGATGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGAAGGAGAGTTATTACAATGGGAGGATGTTCAAAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTTTTGAGGCTGTCGCCACCCGTCGGCGGCGCTTATAGAAATGCTATGAAGGATTTGACCTATGCTGATTATAACATCCCTATTGATTGGAAGTTGCATTGGAACACTCATACGACACACATGGATCCAACACTGTTTACAAATCCTGAAAAATTTGATGCATCAAGATTTGAAGGAGAAGGACCAGTACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGACAAGAGTTTGCTCGGCTAGAGATACTTGTGTTTATGCATAATATTGTGAAACGTTTCAAGTGGGATTTAGTTAATCCTGATGAGAATTTCAAGTATGATCCTATGCTAGAACCTGAAAAAGGACTTCCAATTCAACTTCATCCTTCCAATTACACATCATAG 768 0.3789 MKAADEIKKEIKLIMKKRKVDLEEKKASPTQDLLSHLLVTPDTSGRFMSEVEILDNMLLLLFAGHDTSRLVISLIMKYLGNLPDVYEQVLKEQLEISQGKEEGELLQWEDVQKMKYSWNVASEVLRLSPPVGGAYRNAMKDLTYADYNIPIDWKLHWNTHTTHMDPTLFTNPEKFDASRFEGEGPVPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVNPDENFKYDPMLEPEKGLPIQLHPSNYTS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05261 255 Gene3D Cytochrome P450 1 251 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 PRINTS P450 superfamily signature 63 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 PRINTS P450 superfamily signature 119 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 PRINTS P450 superfamily signature 191 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 193 202 IPR017972 GO:0005506|GO:0016705
Vivi5g05261 255 PANTHER CYTOCHROME P450 26 1 236 - -
Vivi5g05261 255 PRINTS E-class P450 group I signature 190 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 PRINTS E-class P450 group I signature 200 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 PRINTS E-class P450 group I signature 52 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 PRINTS E-class P450 group I signature 158 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 Pfam Cytochrome P450 3 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05261 255 SUPERFAMILY Cytochrome P450 2 250 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05261 Vivi-Chr5 154584234 154585594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05261 8 245 Cytochrome P450 AT3G19270 35.146 3.34e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05261 - K20667 vvo:131603323 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05261 5 154584234 154585594 Vivi5g05261 5 154584234 154585594 ECH