Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05260 ATGGAGATGATTAAGCTCATAGTTTTACCAACAGTTCTGGCACTTTTTGTCATCTTTTTGCATTTCATCACAAGAATTATCAAACTCAGAAACCTGAATCTTCCTAAGGGGACCTTAGGATTACCTATCATTGGAGAAACTTTAGAGTTTTTCAAAGCAAATCTTGAGGGGAAACAAATAAGGTTCATACAAGAGAGAATGAAGAAATATGACTCAAGGGTTTTCAAGACATCAATGTTTGGAGAGAATATTGCAGTGTTTTGTGGAACAGCTGGGAACAAATACTTATTTAGCAATGAAAACAAGAATGTTCAAGTGTGGTGGCCTAGTTCAGTTAGGAAGCTGTTAAGGTTGTCTCTCGTTACTAAAGTTGGTGATGAAGCAAAGATAACTAGAAGGTTGCTTATGAGTTTTCTTAATCCAGAGACACTCAGAAATTTCCTACCAAAAATGGATAGGATTGCTCAGCATCATATCAACACACATTGGAAAGGAAAGGAGCAGGTTGTTGTCTATCCAATAATACAGCTATACACATTTCAATTGGCTTGTTGCTTATTCTTAAGCATGGAAGATCCTATCCAACTATCATACCTTTCATCATATTTTGAAGAATTTCTCAAAGGGGTCATCAGCTTCGCCATCAATTTTCCTGGAACAAGGTTTCATACGGCAATGAAAGCTGCAGATGAAATAAAGAAAGAAATTAAATTGATTATGAAGAAAAGGAAAGTGGATTTGGAAGAAAAGAAAGCTTCACCTACACAAGACCTTCTATCACACTTACTTGTTACACCTGACACGAGTGGAAGGTTTATGAGTGAAGTGGAGATTCTTGATAACATGTTACTACTTCTTTTCGCCGGCCATGACACTTCCAGATCAGTAATTTCATTGATCATGAAGTATCTTGGAAATTTGCCTGAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGAAGGAGAGTTATTACAATGGGAGGATGTTCAAAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTTTTGAGGCTGTCGCCACCCGTCGGCGGCGCTTATAGAAATGCTATGAAGGATTTGACCTATGCTGATTATAACATCCCTATTGATTGGAAGTTGCATTGGAACACTCATACAACACACATGGATCCAACACTGTTTATAAATCCTGAAAAATTTGATGCATCAAGATTTGAAGGAGAAGGACCAATACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTCTGGGACAAGAGTTTGCTCGGCTAGAGATACTTGTGTTTATGCATAATATTGTGAAACGTTTCAAGTGGGATTTAGTTAATCCTGATGAGAATTTCAAGTATGATCCAATGCTAGAACCTGAAAAGGGACTTCCAATTCAACTTCATCCTTCCCATTACACATCATAA 1443 0.3721 MEMIKLIVLPTVLALFVIFLHFITRIIKLRNLNLPKGTLGLPIIGETLEFFKANLEGKQIRFIQERMKKYDSRVFKTSMFGENIAVFCGTAGNKYLFSNENKNVQVWWPSSVRKLLRLSLVTKVGDEAKITRRLLMSFLNPETLRNFLPKMDRIAQHHINTHWKGKEQVVVYPIIQLYTFQLACCLFLSMEDPIQLSYLSSYFEEFLKGVISFAINFPGTRFHTAMKAADEIKKEIKLIMKKRKVDLEEKKASPTQDLLSHLLVTPDTSGRFMSEVEILDNMLLLLFAGHDTSRSVISLIMKYLGNLPEVYEQVLKEQLEISQGKEEGELLQWEDVQKMKYSWNVASEVLRLSPPVGGAYRNAMKDLTYADYNIPIDWKLHWNTHTTHMDPTLFINPEKFDASRFEGEGPIPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVNPDENFKYDPMLEPEKGLPIQLHPSHYTS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05260 480 FunFam Taxadiene 5-alpha hydroxylase 26 476 - -
Vivi5g05260 480 PANTHER CYTOCHROME P450 26 32 461 - -
Vivi5g05260 480 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 SUPERFAMILY Cytochrome P450 28 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Vivi5g05260 480 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 Pfam Cytochrome P450 35 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05260 480 CDD CYP90-like 66 475 - -
Vivi5g05260 480 Gene3D Cytochrome P450 23 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05260 Vivi-Chr5 154569459 154571969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05260 33 380 Cytochrome P450 AT5G36110 42.450 2.85e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05260 - - gmx:100778750 758.444