Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05246 ATGGCAAATTCAAAGAGCTCATCGGGTGTCAGAAATTTTGTGTATCCTGGAAAGCAGGCTCATGCTTTGCTTCCTCCCAAAAGCCCATTTCCTAGTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACTGTTGGTTCAAGACCTGTTAATAAGCCAAGAGAAGGAATCACACACCACCAACGTACTTCATCTGAGAGTCATCTTATTGAAGAGCAGCCATCATGGCTCGATGATCTCCTAAATGAGCCAGATACACCTGTCAGAAAGGGCGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATGTCGACACTCTTAATGCGCCGAACATCAGTTATGGGGATCATGACGAGTATAAATATAAGAATTTCTTATCTATTCCAGCTTGGTCACCTCCAGATTTTGATCGTAACAAAGATGCTCGTCATGTACCCATGTATTCAGAAATGAATGCAGCAAAACAGAAAAATAGATCATGGGACTCTTTTTCAAATATGAGTGGCGCTCCATCTGGCAAAGACAATGTAGCTTTTCAGAGATCAGGATCACCGACCCCATGTACACTGTATGAAGCAGATCGGATCCTACCAACAGCAAATGAAAATTATGATTCCGTAGAATCTGGCTTACAAGACACTAGATCATCTTTTGAAAGAAAGGACGGTTTACATGCAAAGTCATCTGCTTCTGAAACAGATACGAAACGTGCTAAACAGCAATTTGCTCAACGATCCCGGGTTCGTAAACTTCAATACATAGCCGAGCTGGAAAGAAATGTACAGTCTTTACAGGCAGAAGGGTCTGAAGTATCGGCCGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATACTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGGCATGTATCAACAACATCTGCAGCAGTCACATCAGCCTCAACAACAACCATCTGGTAGTCATAGACGCACAAACAGCAGAGACCTTGACTCTCAGTTTGCTAACCTTTCTCTCAAGCACAAGGACACCAACTCGGGGCATGACCCTTCAAATGGAGCTCTCAGAATTTAG 1137 0.4248 MANSKSSSGVRNFVYPGKQAHALLPPKSPFPSISQAYADYVSNPTVGSRPVNKPREGITHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRKGGHRRSSSDSFAYVDTLNAPNISYGDHDEYKYKNFLSIPAWSPPDFDRNKDARHVPMYSEMNAAKQKNRSWDSFSNMSGAPSGKDNVAFQRSGSPTPCTLYEADRILPTANENYDSVESGLQDTRSSFERKDGLHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRGMYQQHLQQSHQPQQQPSGSHRRTNSRDLDSQFANLSLKHKDTNSGHDPSNGALRI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05246 378 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 360 IPR044797 -
Vivi5g05246 378 MobiDBLite consensus disorder prediction 202 243 - -
Vivi5g05246 378 MobiDBLite consensus disorder prediction 326 344 - -
Vivi5g05246 378 MobiDBLite consensus disorder prediction 215 242 - -
Vivi5g05246 378 Coils Coil 248 303 - -
Vivi5g05246 378 MobiDBLite consensus disorder prediction 326 378 - -
Vivi5g05246 378 MobiDBLite consensus disorder prediction 54 68 - -
Vivi5g05246 378 MobiDBLite consensus disorder prediction 157 184 - -
Vivi5g05246 378 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Vivi5g05246 378 Gene3D - 236 289 - -
Vivi5g05246 378 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Vivi5g05246 378 MobiDBLite consensus disorder prediction 45 72 - -
Vivi5g05246 378 MobiDBLite consensus disorder prediction 80 99 - -
Vivi5g05246 378 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05246 Vivi-Chr5 154173147 154179134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05246 22 307 bZIP Transcription Factor Family AT2G42380 31.126 6.36e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05246 - - cam:101495568 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05246 5 154173147 154179134 Vivi5g05246 5 154173147 154179134 ECH