Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05245 ATGGGTAAGAAGAGCAAGGGTCTCTTCACCTTTCGCCGCCGGTCTAAGAAATCCTCCGTGCCAAATCAGTCTCCGCCGCATCCTACGGCGGTCGAAATCACCGGTTCACCGTCGGAGAATCGTTTGGTCACAAAAGCAAAGAAAAAAACCGGTGGAGCCAGACTATGGATGCGGTTCGACCGGTCTGGCAAGTCGGAGCTCGTGGAGTGGGAGAAAAACACAATCATCCGCCATGCCGCAATTCCTGCCAGAGACCTGAGGATTCTAGGCCCTGTCTTCTCCCATTCATCCAATATCCTCGCGAGAGATAAAGCAATGGTGGTTAATTTGGAGTTTATAAAAGCAATAGTAACAGCTGAGGAAATTCTATTGCTTGATCCTTTACGTCAGGAGGTTCTTCCGTTTGTTGAGCAATTGAGGCTCCAGCTTCCACACAAGGCTCAGCCCAAACTTCTTGGTGGTGGTGATGAGCAAGAGTTGCCTGTTCCTGAGGGTGGTGAAGGTTTACCTTCGGAGCTTCCGCTTCCGTTTGAGTTTCAAGTGTTGGAGATTGCTTTGGAAGTTGTGTGTACTTATCTGGATTCGAATGTTGCTGACCTTGAGAGAGGGGCTTATCCCGTGTTGGATGATTTGGCTAGGAATGTTAGTACCAAGAATCTTGAACATGTTAGGAGCTTGAAGAGTAATCTTACTCGTCTGCTTGCACGTGTACAGAAGGTGCGAGATGAAATTGAACATCTATTAGATGACAATGAAGACATGGCTCAACTATATTTGACAAGGAAGTGGTTGCAAAATCAACAACTTGAGGCGGCTCAGTTGGGAGCCACAACCTCGAATAACCTTTCAATTGTTCGACGACTTAATTCTACCAGAAGTGGAAGTGTTGTGACTAACAATGATGATAGTGATGTGGAGGACTTGGAGATGTTGCTTGAAGCATATTTTATGCAGTTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACTGAAGACTATGTCAACATCCAGCTTGATAACCATAGGAATGAACTTATCCAACTGCAGTTGACATTGACAATTGCATCATTTGCTATTGCTATTGAGACATTGATTGCTGGTGCATTTGGTATGAACATTCCATGTTCATTATACGATAAAGACGGGATTTTTTGGCCGTTTGTTGGGACTATTACTGCAATTTCCATATTGCTTTTCCTGCTTGTTTTAGCATATGCTAAATGGAAAAAGTTACTGGGATCGTAA 1263 0.4418 MGKKSKGLFTFRRRSKKSSVPNQSPPHPTAVEITGSPSENRLVTKAKKKTGGARLWMRFDRSGKSELVEWEKNTIIRHAAIPARDLRILGPVFSHSSNILARDKAMVVNLEFIKAIVTAEEILLLDPLRQEVLPFVEQLRLQLPHKAQPKLLGGGDEQELPVPEGGEGLPSELPLPFEFQVLEIALEVVCTYLDSNVADLERGAYPVLDDLARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQLEAAQLGATTSNNLSIVRRLNSTRSGSVVTNNDDSDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCSLYDKDGIFWPFVGTITAISILLFLLVLAYAKWKKLLGS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05245 420 MobiDBLite consensus disorder prediction 15 35 - -
Vivi5g05245 420 Gene3D Magnesium transport protein CorA, transmembrane region 358 416 - -
Vivi5g05245 420 FunFam Magnesium transporter MRS2-1 44 127 - -
Vivi5g05245 420 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 356 407 IPR045863 -
Vivi5g05245 420 Coils Coil 223 257 - -
Vivi5g05245 420 CDD Mrs2_Mfm1p-like 56 417 IPR039204 -
Vivi5g05245 420 Gene3D Magnesium transport protein CorA, transmembrane region 133 351 - -
Vivi5g05245 420 Gene3D - 42 127 - -
Vivi5g05245 420 Pfam CorA-like Mg2+ transporter protein 228 411 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi5g05245 420 MobiDBLite consensus disorder prediction 1 35 - -
Vivi5g05245 420 FunFam magnesium transporter MRS2-4 131 351 - -
Vivi5g05245 420 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 30 418 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05245 Vivi-Chr5 154164672 154167929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05245 6 420 MRS2 Gene Family AT3G58970 65.904 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05245 K16075 - gmx:100812561 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05245 5 154164672 154167929 Vivi3g03289 3 55601727 55603278 PCT