Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05219 ATGGTTATCTTTTTCCAATCCTTGTTCCTAATTTTGATTACCTTGATAGTATCTACTTGTGTTTTCCACAAAAGAAAACAAGCTAGCACAAAAAACTTGCCACCAGGTACTTTTGGTTGGCCATTAGTTGGTGAAAGTTACCAATTTTTGTTCAAAAACATTGAAAATTTTATTCAAGAAAGATCAAAAAAGTACTCATCAGAGATTTTCAAAACAAAGCTATTGGGAGAAAAAACAGTGGTCATGTTTGGTCCTAATGCTAACAAATTCATGTCAATGAATGAATCAAAACTTGTCAAAGTTTGGTACTTGAAAACTCAGTGCAAGTTATTCAATCTTCCCTATCAGAATCAGAATCAGAATCAAATCCGAGTAGTTGTAGCTTCTGCTCCGGTGAAAATTTTGGGGTTTCTTAAGCCCGAAGGAATAGTTAAATACATGAAGAACAACAACAAAATTGAATCAATCATACACAAACATTTCATGACACATTGGGAAGGAAAAAAAGAACTAAAAGTGTACCCTTTGGTGAAATCTTTTTCAATTTCATTAGCTTATCAATTCTTCTTAGGAATCGATGAGCCTAATTACGTAGCAAAATTTGCAACCGAGTTTGAGAATTTGTATTCCGGGATTTATTCGGTTCCTGTGAATTTTCCGGGCTCTACATTTCGTAAAGCAATGAAGAGTGCATCTGAAATTAGGAAAGAGATTCAGTTTTTGATTAAAGACAAGATTGATAGTTTGTCGAATGGAAAAGTTATGGATGATTTATTAGCATATATAGTTGATGCTGAGATGAGCGGAAAATATGTGCCTAAAATTGAAATAAGTAATATCATCATGGGGTTGATGAATTCTAGCTTTATCTCAATAGCTATCACTTTGGCTTTCATGATCAAACATATTGGATTGAGGCATGATATCTACCAAAGAATTCTATCAGAGCATTCTGAAGTTAAAAGATCATCGAAAGGAAGTGATACATCAGTGCTAGATTGGGAGAGCATACAGAAGCTGAAATATACATGGGCTGTTGCACAAGAAACCATGAGACTCTACTCAGCTGCACCAGGAGCATTCAGAGAGGCTAAAACCGATATCACCTATGAAGGTTTTACAATTCCAAAGGGATGGAAGATATTTTGGGCGTTTGTTGGAACAAATAAGAATCCGAAATACTTTAATGAGCCGGAAAGTTTTGATCCTTCAAGATTTGAAGGGAATAATGTTCATGCACCATATAGTTTTATACCCTTTGGAGCAGGGCCAAGATCTTGTCCTGGAAAGGACTATACCCGGTTTGTGATTCTCACTTTCATTCACAATCTTGTAACAAAGTTTAAATGGGAAGTTATAGTTCCTGATGAGAAAGTATCTGGTGCTTTGATACCTATCCCTGCTGAGGGAGTTCCTATCCGTCTTTATAAATTGTAA 1437 0.3549 MVIFFQSLFLILITLIVSTCVFHKRKQASTKNLPPGTFGWPLVGESYQFLFKNIENFIQERSKKYSSEIFKTKLLGEKTVVMFGPNANKFMSMNESKLVKVWYLKTQCKLFNLPYQNQNQNQIRVVVASAPVKILGFLKPEGIVKYMKNNNKIESIIHKHFMTHWEGKKELKVYPLVKSFSISLAYQFFLGIDEPNYVAKFATEFENLYSGIYSVPVNFPGSTFRKAMKSASEIRKEIQFLIKDKIDSLSNGKVMDDLLAYIVDAEMSGKYVPKIEISNIIMGLMNSSFISIAITLAFMIKHIGLRHDIYQRILSEHSEVKRSSKGSDTSVLDWESIQKLKYTWAVAQETMRLYSAAPGAFREAKTDITYEGFTIPKGWKIFWAFVGTNKNPKYFNEPESFDPSRFEGNNVHAPYSFIPFGAGPRSCPGKDYTRFVILTFIHNLVTKFKWEVIVPDEKVSGALIPIPAEGVPIRLYKL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05219 478 Pfam Cytochrome P450 34 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 Gene3D Cytochrome P450 22 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vivi5g05219 478 SUPERFAMILY Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 CDD CYP90-like 61 477 - -
Vivi5g05219 478 PRINTS E-class P450 group I signature 184 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05219 478 PANTHER CYTOCHROME P450 26 31 455 - -
Vivi5g05219 478 FunFam Taxadiene 5-alpha hydroxylase 24 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05219 Vivi-Chr5 153643094 153645021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05219 3 472 Cytochrome P450 AT3G19270 28.151 9.51e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05219 K20667 - tpra:123917065 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05219 5 153643094 153645021 Vivi5g05219 5 153643094 153645021 ECH