Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05198 ATGTTAGAACCTCCTGCACGTGATTCTGAGTTGAGTTTAGAGACTGTGAATTCCACACAACGAAGTTCAATGAGCAGTGAAAGCCTCTGCAGCACGAGTTTCAGTCGTCTTTCATTCGACCTTATCCCTGCTTCCCCTGAGAGCCTCTCCATCAAGCCTCACCGCTCCTCTGATTTTGCTTACTCCGCTATCCGTTCCGCTACATTCCGCCGCAAATCGGCACTTACCTTCCGTGACTTTCACCTCCTCCGTCGTATCGGTGCCGGTGATATTGGTACTGTTTACCTCTGCCGCCTCCGAAACAGAAATAACAAATTCGAAAATGAAGAAGAAGCTTCTTGCTTGTATGCGATGAAGGTAGTGGATAAAGAGGTTGTAGCATTGAAGAAGAAAGTAGAGAGAGCTGAAATGGAGAGAAAGATCCTCAAGATGCTTGATCATCCTTTTCTACCTACACTTTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGTTCCGGTGGAGACTTGCATTCTCTACGCCATAAATATCCTAATAACCGTCTTCCTCTTTCTTCCGCAAGATTTTATGCATCTGAGGTGTTGGTGGCGTTGGAGTACCTTCACATGCTTGGAATCATTTACAGAGATCTAAAGCCTGAGAATGTGCTAGTCAGATCCGACGGTCACATTATGCTTTCAGATTTCGATCTTTCACTCTGCTCTGATGCGATCCCCGCCGTTGAATCATCAGATTCATTACAAGACTCCGCGTTTCCACCAACATTACCATGCACTCGCACGCGTTCTTTCTCTACTCCATTCACTTGCTTCTCAAATCGGTTATTCCGGTCTCGTAAGGTTCAAACCATTCAACCGAACCGGCTCTTTGTAGCTGAACCGGTTTCAGCCCGGTCCTGTTCATTTGTTGGAACACACGAGTACGTCTCACCGGAGGTAGCTGCCGGAAACTCCCACGGAAACGCCGTAGACTGGTGGTCGTTTGGAATATTCATCTACGAACTCATCTATGGACATACTCCATTTGCAGCTCCATCGAACAAGGCTACGCTGCGTAGCATCTTAAAAAAACCCTTAACCTTTCCCACAGCCACGCCTTCAACCACGCTTGAACGTCACGCGCGAGACTTGATTTGTGGTTTGCTTAACAAGGACCCGGCTCAACGGCTCGGGTCAAAGCGCGGGGCAGCTGACGTCAAGAAGCACCCGTTTTTCAAAGGGATTAACTTGGCGCTGATTCGCATGCTGACGCCGCCTGAAGTTCCTGGCTCAAGAAGGCCAAAAACGACGTCGTCGTACCGCGGTAACGTTAGTAGTAGTAGACAGGAACCAACGGCGTCGTTTGATATTTTCTTTTGA 1374 0.4774 MLEPPARDSELSLETVNSTQRSSMSSESLCSTSFSRLSFDLIPASPESLSIKPHRSSDFAYSAIRSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRNRNNKFENEEEASCLYAMKVVDKEVVALKKKVERAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKYPNNRLPLSSARFYASEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDSLQDSAFPPTLPCTRTRSFSTPFTCFSNRLFRSRKVQTIQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGHTPFAAPSNKATLRSILKKPLTFPTATPSTTLERHARDLICGLLNKDPAQRLGSKRGAADVKKHPFFKGINLALIRMLTPPEVPGSRRPKTTSSYRGNVSSSRQEPTASFDIFF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05198 457 Pfam Protein kinase domain 80 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05198 457 Pfam Protein kinase domain 304 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05198 457 Gene3D Transferase(Phosphotransferase) domain 1 304 428 - -
Vivi5g05198 457 Gene3D Transferase(Phosphotransferase) domain 1 170 237 - -
Vivi5g05198 457 ProSiteProfiles Protein kinase domain profile. 80 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05198 457 SUPERFAMILY Protein kinase-like (PK-like) 60 433 IPR011009 -
Vivi5g05198 457 Gene3D Phosphorylase Kinase; domain 1 429 439 - -
Vivi5g05198 457 PANTHER FLIPPASE KINASE 1-RELATED 19 430 - -
Vivi5g05198 457 FunFam serine/threonine-protein kinase D6PK-like 302 428 - -
Vivi5g05198 457 FunFam protein kinase PINOID 2 78 169 - -
Vivi5g05198 457 MobiDBLite consensus disorder prediction 1 24 - -
Vivi5g05198 457 Coils Coil 118 145 - -
Vivi5g05198 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Vivi5g05198 457 Gene3D Phosphorylase Kinase; domain 1 78 169 - -
Vivi5g05198 457 MobiDBLite consensus disorder prediction 429 451 - -
Vivi5g05198 457 SMART serkin_6 80 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g05198 457 MobiDBLite consensus disorder prediction 424 457 - -
Vivi5g05198 457 FunFam protein kinase PINOID 170 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05198 Vivi-Chr5 153172399 153174265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05198 8 456 AGC Kinase Gene Family AT2G34650 65.275 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi5g05198 Pkinase 2.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05198 - - vun:114177159 698.353