Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05172 ATGGGAGTTTTTACCTTCGTCCTCAACAAAACTGGCGCTGAATGGAGCGCAAAGCAACACTCCGGTGACATTGAGGCCTCCGCTGGGTCTACCTTCGAGATCCAACGGGAACTTGTTAAGGCTGCTCTCGCAGTTGATTCTGGCAGCGTTCAGTCCTCTTACTCTCCAATCTCCCCCTCATCTGCCGTCTTCCAGGTGATCGTTGGTGGTGCTGTATTTGTTGGAGGTGGTGCTGCTGCAGCTGCTCCCGCTGGAGGTGCTGCCCCAGCTGCTGATGCCCCTGCTGCCTCAAAGAAAGAAGAGAAGGTAGAGGAAGAGGAGGAAGATGACGACATGGGTTTCTCCCTCTTTGATTAG 357 0.5406 MGVFTFVLNKTGAEWSAKQHSGDIEASAGSTFEIQRELVKAALAVDSGSVQSSYSPISPSSAVFQVIVGGAVFVGGGAAAAAPAGGAAPAADAPAASKKEEKVEEEEEDDDMGFSLFD 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05172 118 Pfam 60s Acidic ribosomal protein 34 117 - -
Vivi5g05172 118 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 118 IPR044252 GO:0003735|GO:0005840
Vivi5g05172 118 MobiDBLite consensus disorder prediction 103 118 - -
Vivi5g05172 118 MobiDBLite consensus disorder prediction 80 118 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05172 1 68 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 63.768 4.91e-25 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05172 K02942 - gmx:100804776 99.3673