Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05171 ATGTCGAAACCCTGGGGGAACATCGGAGCTTGGGCCGCCGATTCCGAGCGCGCCGAAGCCGAGGAACGTGAAGCCGCTGCTGAGGCAGCCACCGCCGGGTCGGCTAACTTCCCGAGTCTCAAGGAAGCCGTGACTGCTAAGCCGAAGAAGAATAAGAAGATGTCGCTTTCTGAGTTTACCGGAGGCGGTTACGCTTCCGGTGGTAGTGCTGCTGCGTATCCTCGGTTGACTCCGGATGAGATGCTTCGTCTTCCGACCGGGCCTAAGGAACGTTCCGCTGAGGAAATGCAGTTTAACCGTCTCGGTGGTGGTTTCTCCTCTTTTGATCGTTCGGGACGTGGTCGAGATCGCGAGGGAGGCTCTGGAGATGCTTCGTGGGGTGCTGGGAGAAGATCTTATGGTGGATTTGATGATGAACGCAGGGCACCGAATTCTAGGGTTTCGGAAATGGATCAACATTCGAGGGCTGACGAGGTGGATAATTGGGCTTCGGTGAAAAAGTCACTTCCCTCGTTTGATTCAGGCCGGCAGAATCGATACAGCGGTAGTGGCGGCGGTGGTGGTGGTGGGGGTGGTTTTGGTGGTGGTGGTGGTGGGGGAGGTGGTTATGGTGGTGAATCTAAGGCTGATGGAGTGGACAATTGGGCGGTTGGTAAAAAGCCTCTTCCTGTTAGGTCTTCTGATTATCGTGATTCTGGCATGAATACAGATCGCTGGTCCAGGGGTTCTGCTGTGGAACCAGATCGCTGGTCCAGGGGAGCGCCACGTGATACGGAGCAGCAGCGGCCAAGGTTGGTGTTGGATCCAAGGAAAGGTGATGGCTCTGTGAATGAGGCTCCGGCGAAGACAAATAAGCCGAATCCATTTGGGGCGGCAAGGCCTAGGGAGGAAGTGTTAGCTGAGAAAGGATTTGATTGGAAGAAGCTTGATTCTGAGATTGAGGCAAAGAAGACAAGTAGGCCTTCGAGTTCACATTCCAGCAGGCCTTCAAGTGCTCAGTCAAATCGCTCTGAAGGTCCAGACGGTGCGCTGAAGCCGAGGCCAAAGGTTAATCCCTTTGGAGATGCCAAGCCAAGGGAGGTGTTGCTTAGCGAGCGTGGCAAGGATTGGCGGAAGATTGATCTTGAATTGGAGCATCGCGCTGTTGATAGGCTTGAGACCGTTGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAAATTGAGAAGGAGTCTTCAATAAGTTCAAATAAGGAAGTGGATGATGCTGTTGGAGAGCAAACTGGTACTCGTACACTGCTACTAGAGAAAGAAAAGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTGGAAAGGCCAGGTTCGTCATCAGGAAAGACTGCTGGTTTTCCTGATCGGCCACCATCTCGTTCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTTCGGACCGACCCCGTTCCCGTGGCACAGGAGATATGTCGATGCGTCCTACTGATGACAGAAGACAATTTCAAGGTAGCAAGGACAGGGGGTGGTTTTCAAACAGCAGTGACTTGAATAGGCCAAGGTCTAGAGAGAGATGGTGA 1605 0.5178 MSKPWGNIGAWAADSERAEAEEREAAAEAATAGSANFPSLKEAVTAKPKKNKKMSLSEFTGGGYASGGSAAAYPRLTPDEMLRLPTGPKERSAEEMQFNRLGGGFSSFDRSGRGRDREGGSGDASWGAGRRSYGGFDDERRAPNSRVSEMDQHSRADEVDNWASVKKSLPSFDSGRQNRYSGSGGGGGGGGGFGGGGGGGGGYGGESKADGVDNWAVGKKPLPVRSSDYRDSGMNTDRWSRGSAVEPDRWSRGAPRDTEQQRPRLVLDPRKGDGSVNEAPAKTNKPNPFGAARPREEVLAEKGFDWKKLDSEIEAKKTSRPSSSHSSRPSSAQSNRSEGPDGALKPRPKVNPFGDAKPREVLLSERGKDWRKIDLELEHRAVDRLETVEEKLLKEEIDNLKKEIEKESSISSNKEVDDAVGEQTGTRTLLLEKEKELELLIRDLDDKVRFGQKAVERPGSSSGKTAGFPDRPPSRSGSFEDSRSVDFSDRPRSRGTGDMSMRPTDDRRQFQGSKDRGWFSNSSDLNRPRSRERW 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05171 534 MobiDBLite consensus disorder prediction 311 362 - -
Vivi5g05171 534 MobiDBLite consensus disorder prediction 452 534 - -
Vivi5g05171 534 Pfam Plant specific eukaryotic initiation factor 4B 1 517 IPR010433 GO:0003743
Vivi5g05171 534 MobiDBLite consensus disorder prediction 482 513 - -
Vivi5g05171 534 MobiDBLite consensus disorder prediction 133 162 - -
Vivi5g05171 534 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 534 IPR010433 GO:0003743
Vivi5g05171 534 MobiDBLite consensus disorder prediction 167 181 - -
Vivi5g05171 534 MobiDBLite consensus disorder prediction 242 271 - -
Vivi5g05171 534 Coils Coil 390 410 - -
Vivi5g05171 534 MobiDBLite consensus disorder prediction 322 338 - -
Vivi5g05171 534 MobiDBLite consensus disorder prediction 404 429 - -
Vivi5g05171 534 MobiDBLite consensus disorder prediction 1 296 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05171 1 534 Eukaryotic Initiation Factors Gene Family AT3G26400 54.724 3.75e-145 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05171 5 152874350 152879937 Vivi5g05171 5 152874350 152879937 ECH