Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05145 ATGTTACTCACTCATCACCTTCATCTCCCTTTCACACATTCACCTTCTTCATCTTCAACTACTTTCACCACCCCCTTCCGCCCCTTGCACCTCACCACTCCAATCCTCAACCTCAAACTCCCACCCACACCCCCCCGGTTTACTTCCTTCACCCTCCACGCCGATTCATCCCGCCGCCAATCCCAACCCTCCATCTCCAACTACGTCGTCGCCAATTCCATTTTCGATTCCGTCATCGACTCCTTCCTTTCAGTGCTCGAGTTCCTGTGTCTTCTCTCTTCGCTCATCGTGTCGGCTAACGTCGCCGTGATTGCGCTGTGGAAGAAGGAGTTGTATGAAGCGATTGGGAGTAGGGTTGCTCCGTTGAGTATGTTGTTGCTTGTGGTTGGTGTTTTGAGTGGCGCGTTGATTAGGAGAAGGAGGGATGTTGTGATTGAGGGAGTTCCGGTGTCGAAGGTGAGTTTGTTGCCGAGGATTCAGAAATTGGAAGGGGATATGGCTAGGTCTGCTAATGTTATTAGGATTTTGTCTAGGCAGCTTGAGAAATTGGGGATGAGGTTTCAGCTTACTCGGAAGAATATGAAGGAACCAATATCTGAGACTGCTTCTCTCGCACAGAAGAATTCCCAGGCCGCAACAGTATTAGCCATGCAATCAGATGTTTTAGAGAAGGAGGTCCAGGAAATTCAGAAAGTCTTACTAGCAATGCAGGAACAACAGCAAAAACAACTCGATCTCATTCTTGCAATTGTGAAGCCAGGTAAGCCATGGGAAAGCAAGCAAGTTAATGAGGTGAATCAGGAGGTCCACCAAATTTGA 819 0.4835 MLLTHHLHLPFTHSPSSSSTTFTTPFRPLHLTTPILNLKLPPTPPRFTSFTLHADSSRRQSQPSISNYVVANSIFDSVIDSFLSVLEFLCLLSSLIVSANVAVIALWKKELYEAIGSRVAPLSMLLLVVGVLSGALIRRRRDVVIEGVPVSKVSLLPRIQKLEGDMARSANVIRILSRQLEKLGMRFQLTRKNMKEPISETASLAQKNSQAATVLAMQSDVLEKEVQEIQKVLLAMQEQQQKQLDLILAIVKPGKPWESKQVNEVNQEVHQI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05145 272 Coils Coil 219 242 - -
Vivi5g05145 272 PANTHER TRANSMEMBRANE PROTEIN 23 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05145 Vivi-Chr5 152330306 152334444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05145 19 258 Eukaryotic Initiation Factors Gene Family AT5G65250 43.033 2.83e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05145 - - vvo:131603248 471.855