Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05097 ATGTCTCATCCAAAGTACGATGTGTTCCTCAGCTTTAGAGGAGAGGACACTCGTGACAACTTCACCAGTCATCTTCATGCAGAATTGTGTAGGCAAAGGATTGAAACATTCATTGATAATAGACTTGTCAGGGGCGAAGAAATTTCTCCAGCACTGTGCAAAGCAATAGAAGAATCAGCTATTTATGTGGTTATTTTGTCAAAACACTATGCTTCTTCTACGTGGTGCTTAGATGAACTCACAAAGATACTCGAATGTAAGGAGAAATATGAAAGGGAAGTGATACCAGTCTTCTATAGGGTGGATCCGTCAAATGTTAGGCATCAGAAAAAGAGTTATGCTGACGATTTTGTTAAACATCTGCCATTAGGCGACAAAGTGGACGCATGGAAGGCTGCTCTAACCCAAGTAGCTAAACTCTCTGGCTGGGATTCACAGAAAATCAGGCCAGATAGCACACTTGTTGAAGAGATTGTGAAAGATATTCTGAAAAAGTTGAGTCGTTGTGGCTTATATAATCATGAAGGAAAGATTGGAATTGACAAGCATATTGAACAAATCCAAAACTTGTTGCACCTCGAGTCATCGGCTGTCCATATTATAGGAATATGGGGTATGGGAGGGATAGGAAAAACTGAAATTGCCGGTGCAATTTATGAAAAACTCGCAACTCATTTTAATTCTAGAGGCATAGTAAAAAACGTTCAACTGGAAATAGAAAAATATGGAGTAGACAATGTTAAAAGCAAATACTTATCACACCTTCTAGATAAACAAGACATTACTTCCTCTAGATTCAAACGGACAAAGGTTCTTCTTGTTTTTGATGATGTCAAAGATTCTGATCAATTTATTGATTTAATTGGGACATGTAGTAATTTTGTCCACGGGAGTAGAATTATTGTGACTAGTAGAGACAAACAAGTACTTAAGAATGCCAATGTTGATGAAATGTATCACGTAATTGAGATGGACGAGAAAGATTCTCTACAACTCTTCTGTTTAAATGCCTTTAAACAAAAAGAACCAATAGAAACTTATGCGAGTTTAACAAAAAAGGTATTAAATTATGCTAAAGGAGTTCCATTAGCTCTTAAAGTTTTGGGCTTATTTCTTCAAGGTAGAGCAAAGGAAGCGTGGGAAAGTGAGTTGCAAAAGCTTGAAAAGAATCCCGAGCCTAAAATTTTCAATGTGTTGAAATTGAGTTATGATGGACTTGATGACGAACAAAAAGATATATTTCTTGATATAGCTTGTTTCTGTAGAGGAGAAACCGAGAAATGCGTGGTTCAAACACTGGATTGTTATGGTTTTTCTACTCGTATTGGAATGGATGTTCTTCAAGATAGGTGTCTTATATCTATTTTAGAAGGTAGAGTTTGGATGCATGATCGAATACAAGAAATGGGACATGAAGTTGTTCGACAGCAAAGTGTCAATAATCCGGAAAAACGTAGTCGATTGCACAAACCTGAAGATATATATAATGTTTTAAAAAAGAACAAGGGACAGGGAACAGATGCAATCCAGAGCATAGCATTGGACTTAAGCAAAATAAACGAAGTTCAGTTACATGCCAAAACTTTTAAGAAAATGCATAATCTCAGAATGATTAAGTTCTATAATTCTTATTGGTTTGAAAGTTACTCAAATGTGACATTTCATACATTTCTTAATAGTTTTCCGGATAATCTAAAATTTCTTGGTTGGGTTGGTTTCCCTCAAAGATCTTTGCCGCAAGATTTTTGCCCAAATAATCTTGTTGCACTTGATATGCATTCAAGCGATCTTGAACAACTATGGGAGAGAGATCAGACTTTACCAAATTTGAAGAGACTTAACCTTAGCTGTTCTCAGAAGATGATTGGAGTACCTGACCTGTCTTTGTTTCCTAATATTGAAGAAATAATTCTTAGTGGTTGTGTAAGTTTGAAAAAAGTGTACTCCTCTAGCTTCCTCCACAAACTTAACCGGTTATGTGTAGATGGCTGTACATCACTCAAGAGTTTAAGTATTCGTAGCAATATTCTATCAAGATCAACCGGATTAGTTGCTCTGCATGGTTGTCGCAAAATTGAAACAATTCTAATCACCGGAACAACTGACGTGGTTCAATCATACAATTGCTTTAATTCCTATGAGTCAAATTTTGAGGGAGGCGACTGGATTGGGGATATGGATATAGATTCAGATATGTTTTCAAGTATCAGTGAGCTTTGTTTGTTAGATCTTTCGGAATGTGAGTCCCTAACAAGCCTACCAGCTGAACTTATAAATTTGAAGTTTCTAACAAGACTTTGTCTCAGTGATTGTTTAAAGTTGGAAGAGTTACCTGAGATCGAGGAGATTATGGAAAATCTAAAAGTGCTCAGCTTAGAAAAAACAGCAATAAAGGAACTCCCTTCATCGCTACACCGTTTGGTTGGGCTTGAAGAATTGAGTTTGCGAGGTTGCAAAAAGCTTAAGACTATTCCATCTTCCATTGGAAGTCTCAGCAAACTTCTCAAATTAGACATTACCTACTGTAAATCACTTGAAACTTTTCCAAGCAGCATTTTCAAATTGAAGTTGACAGAACTTGATTTTTCGGGTTGCTCAATGCTTAGGATTTTTCCAGAAATCCCAAGTGACATTGGTCGTATGTCATTCTTGACTAAAATTTCACTTCAAGGAAGCAGAATTGTGAATCTTCCTGAGAGTATGGTTCATCTCTCAAGTTTGAAATCACTTAATTTAAGTGATTGCAAAAGCCTTGAATGTATTCCAAAGCTTCCACAGAATCTAATTCAGTTGTTGGCATTTGATTGCACATCCATTAAGAAAGTGGTGCGAAATTCATTGTTGGCACTCATGTCTGATTCCAATGACAAAATGGATGGTTCCTACGAATTTCTTCTCACCAACAGTGAAGAGTTAGATGCATTTTCTTGGAATTATATAGTAAACAAAGCATGTATTAAGATCACTGATAATGCATATCTGTCAGCGGTCTTTTGTTTTCCGGGGAGTAGAGTTCCAGATTGGTTCCTTCACCGTTGCCACGGGCATTCAATAACTGTGAAAAATAATGATGAATATGTGTGCAGTGAAAACAGGCTCATTGGTTTTGCTCTGTGTGTTGTTTTAGGAGGTGAAGATATGGATGACTCAAGAAGAGGTAGTAGCATTACATACAAATTAAGCTTTATATCAGATGGTAAGCCATTCGTTTTTCATGACGATATGAATTGGATGCTGGGAGATAGATTTATCATCCGAGATCACACATTCCTATGGAAATATGAATTAGACCGAGCAACCATTTGCAACAAGCTCATTCATGCCCAAAGTTTCACTTTTGAGATCCTAGGTGATGATTATGTTAGGCCCTCAGATTATCAATTAAACGTAATTGTGAAAGAGTGTGCAATATGTCCTCTGTATATTCGAAAGAACCAAATGTGA 3444 0.3673 MSHPKYDVFLSFRGEDTRDNFTSHLHAELCRQRIETFIDNRLVRGEEISPALCKAIEESAIYVVILSKHYASSTWCLDELTKILECKEKYEREVIPVFYRVDPSNVRHQKKSYADDFVKHLPLGDKVDAWKAALTQVAKLSGWDSQKIRPDSTLVEEIVKDILKKLSRCGLYNHEGKIGIDKHIEQIQNLLHLESSAVHIIGIWGMGGIGKTEIAGAIYEKLATHFNSRGIVKNVQLEIEKYGVDNVKSKYLSHLLDKQDITSSRFKRTKVLLVFDDVKDSDQFIDLIGTCSNFVHGSRIIVTSRDKQVLKNANVDEMYHVIEMDEKDSLQLFCLNAFKQKEPIETYASLTKKVLNYAKGVPLALKVLGLFLQGRAKEAWESELQKLEKNPEPKIFNVLKLSYDGLDDEQKDIFLDIACFCRGETEKCVVQTLDCYGFSTRIGMDVLQDRCLISILEGRVWMHDRIQEMGHEVVRQQSVNNPEKRSRLHKPEDIYNVLKKNKGQGTDAIQSIALDLSKINEVQLHAKTFKKMHNLRMIKFYNSYWFESYSNVTFHTFLNSFPDNLKFLGWVGFPQRSLPQDFCPNNLVALDMHSSDLEQLWERDQTLPNLKRLNLSCSQKMIGVPDLSLFPNIEEIILSGCVSLKKVYSSSFLHKLNRLCVDGCTSLKSLSIRSNILSRSTGLVALHGCRKIETILITGTTDVVQSYNCFNSYESNFEGGDWIGDMDIDSDMFSSISELCLLDLSECESLTSLPAELINLKFLTRLCLSDCLKLEELPEIEEIMENLKVLSLEKTAIKELPSSLHRLVGLEELSLRGCKKLKTIPSSIGSLSKLLKLDITYCKSLETFPSSIFKLKLTELDFSGCSMLRIFPEIPSDIGRMSFLTKISLQGSRIVNLPESMVHLSSLKSLNLSDCKSLECIPKLPQNLIQLLAFDCTSIKKVVRNSLLALMSDSNDKMDGSYEFLLTNSEELDAFSWNYIVNKACIKITDNAYLSAVFCFPGSRVPDWFLHRCHGHSITVKNNDEYVCSENRLIGFALCVVLGGEDMDDSRRGSSITYKLSFISDGKPFVFHDDMNWMLGDRFIIRDHTFLWKYELDRATICNKLIHAQSFTFEILGDDYVRPSDYQLNVIVKECAICPLYIRKNQM 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05097 1147 SUPERFAMILY "Winged helix" DNA-binding domain 394 499 IPR036390 -
Vivi5g05097 1147 Gene3D - 173 321 IPR027417 -
Vivi5g05097 1147 Gene3D Ribonuclease Inhibitor 782 952 IPR032675 -
Vivi5g05097 1147 Gene3D Ribonuclease Inhibitor 485 781 IPR032675 -
Vivi5g05097 1147 PRINTS Disease resistance protein signature 902 918 - -
Vivi5g05097 1147 PRINTS Disease resistance protein signature 200 215 - -
Vivi5g05097 1147 PRINTS Disease resistance protein signature 265 279 - -
Vivi5g05097 1147 PRINTS Disease resistance protein signature 358 372 - -
Vivi5g05097 1147 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 143 IPR035897 -
Vivi5g05097 1147 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 756 IPR044974 GO:0006952
Vivi5g05097 1147 FunFam Disease resistance protein (TIR-NBS-LRR class) 325 407 - -
Vivi5g05097 1147 SMART till_3 5 140 IPR000157 GO:0007165
Vivi5g05097 1147 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 168 - -
Vivi5g05097 1147 Pfam NB-ARC domain 181 391 IPR002182 GO:0043531
Vivi5g05097 1147 SUPERFAMILY L domain-like 529 850 - -
Vivi5g05097 1147 Gene3D - 323 407 IPR042197 -
Vivi5g05097 1147 Pfam TIR domain 5 167 IPR000157 GO:0007165
Vivi5g05097 1147 SUPERFAMILY L domain-like 855 937 - -
Vivi5g05097 1147 Gene3D - 3 170 IPR035897 -
Vivi5g05097 1147 ProSiteProfiles TIR domain profile. 4 166 IPR000157 GO:0007165
Vivi5g05097 1147 Pfam C-JID domain 1000 1143 IPR045344 -
Vivi5g05097 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 417 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05097 Vivi-Chr5 151786408 151791853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05097 784 942 WRKY Transcription Factor Family AT4G12020 33.889 2.01e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05097 - - vvo:131632130 2208.33