Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05096 ATGTCTCATCCAAAGTACGATATGTTCCTCAGCTTTAGAGGAGAGGACACTCGTGACAACTTTACGAGTCATCTTCGTGCAGAATTGTGTAGGCAAAGGATTGAAACATTCATAGATGATGATAAACTTGACAGAGGCGAAGAGATTTCACCAGCACTGTGCAAAGCAATAGAAGCATCAGCGATTTATGTGGTCATTTTGTCACAACACTATGCTTCTTCCACTTGGTGCTTAGATGAACTCACCAAGATTCTCGAATGTAAGGAGAGATATGGAAGGGAAGTGATACCTGTCTTCTACAAAGTGGATCCGTCAAATGTTAGGCATCAGAGACAGAGTTATGCAGACGATTTAGTTAAACATCAACGACGATTTGGAGACAAAGTGGACGCATGGAAGGCTGCTCTAACCCAAGTAGCTAATCTCTCTGGCTTGGATTCTCAGAAAATCAGGCCAGATAGTAAACTTGTTGAAGAGATTGTGAAAGATATTCTGAAAAAATTGAATAGTTGTATCTCAAATGATCATGAAGGAAATATTGGAATTGACAAGCATATTGAACAAATCCAAACCTTGTTGCAGCTCGAGTCATCGACAGTTCGTACTATAGGAATATGGGGTATGGGAGGGATAGGAAAAACTGAAATTGCCTGTGCAATCTATGAAAAACTTGCAACTCATTTTAGTTCCAGTGGCATAGTTAAAAATGTTCAACAGGAAATAAAGATATATGGAGTAGACCATGTAAAAAGCAAATACTTATCACACCTTCTAGTTCAACAAGGCATTACTTCCTCTGGACTCAACTTTTTATTTGATCCTAGGCTCAAACGTACAAAGGTTCTTCTTGTTTTTGATGATGTGAAAGATTCTGATCAATTTATTGATTTAATTGGAACATGTAGTAATTTTGGCCACGGGAGTAGAATCATCGTGACAAGTAGAGACAAACAAGTGCTTAAGAATGCTAATGTTGATGAAATGTATCATGTAGTTCAGATGGATGATAAAGATTCTCTACAACTATTTTGTTTAAATGCATTTAAACAAAGAGAACCAATAGAAGCTTATGCGAGTTTAACAGAAAAGGTATTAAATTATGCTAAAGGAGTTCCATTAGCTCTTAAAGTTTTGGGCTTATTTCTCCAGGGTAGAACAAAGGAAGCATGGGAAAGTGAGTTGCAAAAGCTCAAAAAGATTCCCAATCCTAAAATTTTCAGTATTTTGAAGTTGAGTTTTGATGGAGTTGATGACGAACAAAAAGAAATATTTCTTGATATAGCTTGTTTCTTTAGAGGAGAAACCGAGAAACTTATTGTTCAAATTTTGGATTGTTATGGTTTTTCTACTCGTATTGGAATGGATGTTCTTCAAGATAGGTGTCTTATATCTGTTTTAGAAGATAAAGTTTGGATGCATGATCGAATTCAAGAAATGGGACATGAAATTATTCGACAACAAAGTGTCAATAATCCGGAAAAACGTAATCGATTGCACAAACCTGATGATATATATGATGTTTTAAAAAAGAACAAGGGAACAGATGCAATCCAGGGTATATTATTGAACCTAGGCGAAATAAAGAAAGTTAAGTTACATTCTGAAACTTTTAAGAATATGCCTAATCTCAGAATGATCCGGTTCTATGATTCTTATAGGTTTAAAAGTTACTTAAATGTGACTTTTTATACATTTTTGAATGGTTTTTCGGATAATTTGAAAATTCTTAGTTGGGATGGGTTCCCTCAAAGATCTCTGCCGCAGGACTTTTGCCCGGATAATCTTGTTGTACTTGATATGCCTTATAGCGATCTTGAACAACTTTGGAAGAGAGATAAGATGACTGGAGTACCAGACCTGTCTTTGTTTCCAAATATTGAAGAAATAAGTCTCACTGGTTGTCTCAGTTTGGAACAAGTTTACTCCTCTAGCATCCTCCACAAACTTAACTGGTTACATGCAGATGGTTGCACATCACTCAAGAGTTTAAGTATTCGTAGTAATATTCTATCAAGATCAACCGGATTAGTTGCTCTGCATGGTTGTCGCAACCTTGAAACAATTCTAATCACCGGAACAACGGATGTGGTTCAAACATACAGTATTGTTAATTCCTATGAGTCAAATTTTGAGGGAGGCGACTGGATTGGGGATATGGATTCAGATATGTTTTCAAGTATCAGTGAGCTTTGTTTGTTAGATCTTTCGGAATGTGAGTCCCTAACAAGCCTACCGGCTGAACTTATAAATTTGAAGTTTCTAACAAGACTTTGTCTCAGTGATTGTTTAAAGTTGGAAGAGTTACCTGAAATCAAGGAGATTATAGAAAATCTAAAAGTGCTCAACTTAGAAAAAACAGCAATAAAGGAACTACCTTCATCGCTACACCGTTTGGTCGGGCTTGAAGAATTGAGTTTGCGAGGTTGCAAAAAGCTTAAGACTATTCCATCTTCCATTGGAAGTCTCAGCAAACTTGTTAAGTTAGACATTACCTACTGTAAATCACTTGAAACTTTTCCAAGCAGCATCTTCAAATTGAAGTTGACAGAACTTGATTTTTCTGGTTGCTCAATGCTTAGGATTTTTCCAGAAATCCCAAGTGACATTGGTCGTATGTCATTCTTGACTAAAATTTCACTTCAAGGAGGCAGAATTGTGAATCTTCCTGAGAGTATTGTTCATCTCTCAAGTTTGAAATCACTTAATTTAAGTGATTGCAAAAGCCTTGAATGTATTCCAAAGCTTCCACCATGTCTAAATGAGTTGTTGGCATTAAATTGCACATCCATTAAGAAAGTGGTGTCAAATTCATGGTTGAAACTCATGTCAGATTACAATGACGAAATAGATGATTTCTACGAATTTCGTCTCACCAACAGTGAAGAGTTAGACGCATCTTCTTGGAGTTATATTGTAAACAAAGCATGGATTAAGATCGCTGATGATGGATATCGGTCAGCGCTCTTCTGCTTTCCAGGGAGTAGAGTTCCGGATTGGTTCCTTCACCGAGGCCAGGGACATTCAATAACTGTGAAAAATAATGATGGATATGTGTGCAATGAAAATGGACTCATTGGTTTCGCTCTCTGTGTTGTTTTTGGAGGTGATGACACAAGAACAAGAGGCAGTAGAATTACATACAAATTAAGCCTTTTATTTGATGATAAGTCATTCGTTTTTTATGACGATTTGAATTGGAAGCCAGAAGATAGTTGTATCATCCGAGATCACACATTCTTATGGAAATATCAATTAGACCGAGCAAGCGTTGGCAACAACCTCATTCATGCCCAAAACTTCACTTTTGAGATCATAGGTGATTATTTTAGGCGCTCAGATTGTCAATTAAACATAATGGTGAACGAGTGTGGAATTCATCCTCTGTATGGAAACATTTGGTAG 3402 0.3671 MSHPKYDMFLSFRGEDTRDNFTSHLRAELCRQRIETFIDDDKLDRGEEISPALCKAIEASAIYVVILSQHYASSTWCLDELTKILECKERYGREVIPVFYKVDPSNVRHQRQSYADDLVKHQRRFGDKVDAWKAALTQVANLSGLDSQKIRPDSKLVEEIVKDILKKLNSCISNDHEGNIGIDKHIEQIQTLLQLESSTVRTIGIWGMGGIGKTEIACAIYEKLATHFSSSGIVKNVQQEIKIYGVDHVKSKYLSHLLVQQGITSSGLNFLFDPRLKRTKVLLVFDDVKDSDQFIDLIGTCSNFGHGSRIIVTSRDKQVLKNANVDEMYHVVQMDDKDSLQLFCLNAFKQREPIEAYASLTEKVLNYAKGVPLALKVLGLFLQGRTKEAWESELQKLKKIPNPKIFSILKLSFDGVDDEQKEIFLDIACFFRGETEKLIVQILDCYGFSTRIGMDVLQDRCLISVLEDKVWMHDRIQEMGHEIIRQQSVNNPEKRNRLHKPDDIYDVLKKNKGTDAIQGILLNLGEIKKVKLHSETFKNMPNLRMIRFYDSYRFKSYLNVTFYTFLNGFSDNLKILSWDGFPQRSLPQDFCPDNLVVLDMPYSDLEQLWKRDKMTGVPDLSLFPNIEEISLTGCLSLEQVYSSSILHKLNWLHADGCTSLKSLSIRSNILSRSTGLVALHGCRNLETILITGTTDVVQTYSIVNSYESNFEGGDWIGDMDSDMFSSISELCLLDLSECESLTSLPAELINLKFLTRLCLSDCLKLEELPEIKEIIENLKVLNLEKTAIKELPSSLHRLVGLEELSLRGCKKLKTIPSSIGSLSKLVKLDITYCKSLETFPSSIFKLKLTELDFSGCSMLRIFPEIPSDIGRMSFLTKISLQGGRIVNLPESIVHLSSLKSLNLSDCKSLECIPKLPPCLNELLALNCTSIKKVVSNSWLKLMSDYNDEIDDFYEFRLTNSEELDASSWSYIVNKAWIKIADDGYRSALFCFPGSRVPDWFLHRGQGHSITVKNNDGYVCNENGLIGFALCVVFGGDDTRTRGSRITYKLSLLFDDKSFVFYDDLNWKPEDSCIIRDHTFLWKYQLDRASVGNNLIHAQNFTFEIIGDYFRRSDCQLNIMVNECGIHPLYGNIW 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05096 1133 SUPERFAMILY "Winged helix" DNA-binding domain 404 509 IPR036390 -
Vivi5g05096 1133 SUPERFAMILY L domain-like 571 771 - -
Vivi5g05096 1133 PRINTS Disease resistance protein signature 202 217 - -
Vivi5g05096 1133 PRINTS Disease resistance protein signature 368 382 - -
Vivi5g05096 1133 PRINTS Disease resistance protein signature 275 289 - -
Vivi5g05096 1133 PRINTS Disease resistance protein signature 893 909 - -
Vivi5g05096 1133 Gene3D Ribonuclease Inhibitor 773 968 IPR032675 -
Vivi5g05096 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 144 IPR035897 -
Vivi5g05096 1133 SMART till_3 5 142 IPR000157 GO:0007165
Vivi5g05096 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 817 IPR044974 GO:0006952
Vivi5g05096 1133 Gene3D - 168 332 IPR027417 -
Vivi5g05096 1133 Pfam TIR domain 5 174 IPR000157 GO:0007165
Vivi5g05096 1133 ProSiteProfiles TIR domain profile. 4 168 IPR000157 GO:0007165
Vivi5g05096 1133 SUPERFAMILY L domain-like 721 929 - -
Vivi5g05096 1133 Gene3D Ribonuclease Inhibitor 512 772 IPR032675 -
Vivi5g05096 1133 Gene3D - 333 417 IPR042197 -
Vivi5g05096 1133 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 170 - -
Vivi5g05096 1133 Pfam C-JID domain 991 1129 IPR045344 -
Vivi5g05096 1133 Gene3D - 4 167 IPR035897 -
Vivi5g05096 1133 Pfam NB-ARC domain 183 399 IPR002182 GO:0043531
Vivi5g05096 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05096 Vivi-Chr5 151778488 151786154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05096 775 936 WRKY Transcription Factor Family AT4G12020 35.870 6.61e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05096 - - vvo:131632130 1811.19