Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05068 ATGGCGCTCTCGTTCTCACTCTCTTCAGGCGTAACCGTTTCTAACCGTTTTCCCTCTACTTGTATTTTGAAACCGAATGGTAAGAGTCGTAATGGGCCTAACAAGGTGTTATGTTCGGCGCGTAAGGATAAGACTCCGTTAGTTGGAATTGGATTAGGGATTGTAGCGGCTTGGGTTATGGGTTTAACGGCGTTGGATGCGGATGCAACTAGAATTGAATACTATGCTACTGTAGCAGAGCCAATGTGTGAGCTCAATTACGTTAAGTCTGGGCTTGGTTACTGCGATGTTGTCGAGGGTTTCGGTAATGAAGCTCCTCTCGGAGAGCTTATCGATATTCATTATACTGCGAGATTCGCGGATGGAATCGTGTTTGATAGCAGTTATAAACGTGCTAGACCTCTTACAATGCGGATTGGGGTTGGCAAGGTAATCAGGGGATTGGATCAGGGAATTTTGGGAGGTGAAGGGGTACCTCCGATGCGGATAGGGGGAAAACGCAAGCTAATGATTCCTCCATTGTTAGCATATGGTCCTGAACCTGCAGGGTGTTTCTCAGGTGATTGCAATATACCCGGCAATGCCACTCTTCTGTATGATATTAAATTTGTCGGTCTTTATTCGGGCAATAGAAAGTGA 639 0.4585 MALSFSLSSGVTVSNRFPSTCILKPNGKSRNGPNKVLCSARKDKTPLVGIGLGIVAAWVMGLTALDADATRIEYYATVAEPMCELNYVKSGLGYCDVVEGFGNEAPLGELIDIHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRIGGKRKLMIPPLLAYGPEPAGCFSGDCNIPGNATLLYDIKFVGLYSGNRK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05068 212 Gene3D - 81 206 IPR046357 GO:0003755
Vivi5g05068 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 108 207 IPR001179 GO:0003755
Vivi5g05068 212 FunFam Peptidylprolyl isomerase 80 206 - -
Vivi5g05068 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 105 203 IPR001179 GO:0003755
Vivi5g05068 212 SUPERFAMILY FKBP-like 87 205 - -
Vivi5g05068 212 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 34 212 IPR044183 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05068 Vivi-Chr5 151384841 151387361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05068 84 208 Calmodulin-binding Proteins AT3G25230 37.008 1.99e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05068 K01802 - gmx:100500547 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05068 5 151384841 151387361 Vivi5g05068 5 151384841 151387361 ECH