Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05044 ATGATTTTCATTTATTTAGCTATTTTTCTACTTTCTCTTGCTTTCCTATGGCTATGGGGAACCAACAAAAATACAAATAAACTTCCACCAGGTCCCAAAGGGTTACCAATTTTGGGTAGCCTTCTCAAATTAGGACCAAACCCTCATCGTGATCTTCATCAACTATCTCAAAAATATGGACCCATCATGCACTTAAGGTTAGGCTTAAAACCTACCATAGTTGTTTCTTCACCTCAAGCAGCTGAACTTTTTCTCAAAACTCATGATATTGTGTTTGCTAGTAGACCACCAACCGAGGCAATAAAACACATCTTTTGGGGACAAAGGAACATGAGTTTTGGTGAATATGGTTCTTATTGGCGCAACATGAGAAAAATGTGCACTTTAGAATTATTGAGCCATACAAAAATCAACTCTTTTAGGCCCATGAGGGAACAAGAGCTTGACCTATTGATAAAGTTTCTAAGAGAAAAATCTAATGATGGAACAAAAGTTGATTTAAGTGCTAAGATTTCTTCACTTGCTGCTGATATGAGTTGTAGAATGGTTTTGGGAAAAAAGTTTATGGATAAGGAGTTGGATGAGAAAGGGTTTATGGCTTTGATCCAAGAGGGAATGCAATTAACAGCTACTCCTAATATTGGTGATTATATTCCTTACATTGGAAAACTTGATTTGCAGGGGCTAACTAAAAGTACGAAGGCAATCGGAAAATTTTTTGATGATTTTTTTGACAAAATAATTGATGAACATATTCAATTTGACAACAAAGATGATAAGAGTAAAGATTTTGTAGATGTTATGTTGGGTTTTGTTGGTGTTGAAGAATCTGAATACCGTATTGAACGGTCCAATATCAAAGCCATTATGCTGGATATGTTAGCGGGTTCAATGGATACTTCTGCAACAGCAATTGAGTGGGTAATTTCGGAGTTACTAAAGAATCCAAGAGTGATGGAAAAAGTGCAAAATGAGTTAAAAACTATAGTGGGTACGAAGAGGAAAGTGGAAGAATCAGATTTGGACAAGTTAGAGTATTTGGACATGGTTATTAAAGAAAGCCTTAGGCTCCATCCAGTGGCCCCTCTACTAATACCGCACCAATCATCGGAAGATTGCATGGTTGAAGAATTTTTCATACCTAAAAAGTCACGTGTGATTGTGAATGCATGGTCTATTATGAGAGATCCAAAAGCTTGGACTGATCCAGAAAAGTTTTGGCCAGAGAGATTTGAAGGAAGAAACATAGATATTAAAGGGCGTGATTTTCATTTCATACCATTTGGTTCTGGTAGAAGGGGCTGCCCTGGATTGCAATTAGGTCTAACTATGATTCGTTTGGTGGTGGCACAACTTGTGCATTGCTTTGATTGGAAATTGCCAAATCATGTGTTATCAAGTGATTTGGACATGAAAGAAGAGTTTGGCCTTACTATGCCAAGAGCCAATCATTTAATTGTTATTCCTGTTTATCGTCTTTGTAGTGATAATGATTAG 1497 0.3681 MIFIYLAIFLLSLAFLWLWGTNKNTNKLPPGPKGLPILGSLLKLGPNPHRDLHQLSQKYGPIMHLRLGLKPTIVVSSPQAAELFLKTHDIVFASRPPTEAIKHIFWGQRNMSFGEYGSYWRNMRKMCTLELLSHTKINSFRPMREQELDLLIKFLREKSNDGTKVDLSAKISSLAADMSCRMVLGKKFMDKELDEKGFMALIQEGMQLTATPNIGDYIPYIGKLDLQGLTKSTKAIGKFFDDFFDKIIDEHIQFDNKDDKSKDFVDVMLGFVGVEESEYRIERSNIKAIMLDMLAGSMDTSATAIEWVISELLKNPRVMEKVQNELKTIVGTKRKVEESDLDKLEYLDMVIKESLRLHPVAPLLIPHQSSEDCMVEEFFIPKKSRVIVNAWSIMRDPKAWTDPEKFWPERFEGRNIDIKGRDFHFIPFGSGRRGCPGLQLGLTMIRLVVAQLVHCFDWKLPNHVLSSDLDMKEEFGLTMPRANHLIVIPVYRLCSDND 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05044 498 SUPERFAMILY Cytochrome P450 29 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PANTHER CYTOCHROME P450 93A3-LIKE 3 493 - -
Vivi5g05044 498 CDD CYP71-like 58 485 - -
Vivi5g05044 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vivi5g05044 498 FunFam Cytochrome P450 83B1 16 488 - -
Vivi5g05044 498 Pfam Cytochrome P450 29 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g05044 498 Gene3D Cytochrome P450 20 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05044 Vivi-Chr5 151075233 151077062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05044 1 496 Cytochrome P450 AT5G07990 39.608 6.04e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05044 K20562 - gmx:100809526 781.941