Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04993 ATGGCTTTCCTTCATCCATCTGAAAGTTTTGAAATCAAAATCTCTTCAGAACCATCAGTTCTAGACATTGAGGCCTCCACAACCATACCAGAAGGTAACCACCATGGTATATGCTTAACATGGAAGAATATTTGGGTGAATACAATAGCAAAGGGAAAGAATGGAAGAAGATCAATTCTTCAAGGACTAACTGGATATGCTAAACCAGGTCAACTTTTAGCTATTATGGGTCCTTCTGGCTGTGGCAAGTCTACACTACTTGATACTCTAGCAGGAAGACTAGCCACAAACACAAGACAAACTGGGGACATTCTAATCAATGGTCACAAACAAGAACTATCATATGGAACTTCGGCTTATGTCACACAAGATGATACATTATTAACAACCTTAACTGTTAAAGAAGCAGTGTACTATTCAGCTCAACTTCAATTACCTAACACAATGTCAAAACAAGAGAAGAAAGAAAGAGCTGATTTTACAATCAAAGAAATGGGTCTTCAAGATGCTACTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATAAGTGGGGGTCAAAAAAGAAGAGTTAGCATTTGCATTGAGATTCTAACACGTCCTAGACTTCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCTTACTATGTCATGAAAAGAATTGCTTCTTTGGATCAAAAAGATGGAATTCAAAGGACTATTATCACTTCTATTCATCAACCTAGTTCTGAAGTTTTTCAACTTTTTGATAACCTTTGTCTTCTGTCTTCTGGTAAAACTGTTTATTTTGGACCTGCTTCGGCTGCATGTGAGTTTTTCGCCTTGAATGGATTTCCTTGTCCTCCTCTCCAAAATCCGTCCGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGAAACCGATACAGAAATATCCATTGAAGAAGCAATTAGTATCCTTGTTAGTTCATATAAATCATCTGAAATGAACAAAGATGTTCACAACGAAGTAGCAATGCTATCCGAAAAGCAAATGAAACCAATGGACAAGAACAAAGGTCATGCAGGATTCTTTAATCAATGCTTAGCTCTTATCAAACGATCATCATTGAACATGTTTCGTGATCTAGGCTATTATTGGTTACGTTTAGGGATATATATTGCATTGGCCTTGAGTTTAGGAACTGTTTTCTATGATTTTGATACAAGTTATGCCTCAATTAAGGATCGTGGTTCGCTTCTTTCGTATATCTCTGGATTCTTAACTTTCATGAGCATTGGTGGATTTCCTTCATTTGTGGAAGACATGAAAGTATTTCAAAGAGAGAGACAAAACGGGCATTATGGCGTGGTAGCATATGTGATTGGAAACACATTTTCATCGGTTCCATTCATTTTAGTGGTTTCGATAATTCCATCGGTTATAACTTACTACCTATGTGGTCTTCAAAACGGATATGAACACTTTTTCTACTTTTCTAGTGTTTTATTTTCAAGTCTAATGTTAGTTGAGAGTCTCATGATGATAGTTTCAAGCATTGTTCCTAACTATCTAATGGGAATCGTAACGGGTGCTGGAATTCAAGGAGTCATGATGTTGGTTGGAGGGTTCTTTAAATTGCCACATGATCTTCCCAACTTTTTTTGGAGATATCCATTCCACTATATGGCATTTCACACATATGTAACTGAGGGATTGTTCAAGAATGAGTATGAAGGACTAAGATTTGATGGTCCAAATGCACAAGGCGTAAATATCCACATGACTGGTGAAGAGGTTTTGACAGAGATATGGCAAATTGACATGAGTTATTCAAAGTGGGTTGATCTTGCAATTATGTTTGGGATGATTGTTTTGTACCGTGTTTTGTTTCTTTTTATCATCAAAGGTACAGAGAAGATGAAACCTATTGTTGGATCAATGTTGTATAGGATGGAAGAGTCTTCCAAGACAGTGATACATGTTGAGAAGCCTGATACTACTCCTTTGAATGAGCACGTCGTGTGA 2004 0.3698 MAFLHPSESFEIKISSEPSVLDIEASTTIPEGNHHGICLTWKNIWVNTIAKGKNGRRSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLATNTRQTGDILINGHKQELSYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPNTMSKQEKKERADFTIKEMGLQDATNTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDQKDGIQRTIITSIHQPSSEVFQLFDNLCLLSSGKTVYFGPASAACEFFALNGFPCPPLQNPSDHLLKTINKDFDQETDTEISIEEAISILVSSYKSSEMNKDVHNEVAMLSEKQMKPMDKNKGHAGFFNQCLALIKRSSLNMFRDLGYYWLRLGIYIALALSLGTVFYDFDTSYASIKDRGSLLSYISGFLTFMSIGGFPSFVEDMKVFQRERQNGHYGVVAYVIGNTFSSVPFILVVSIIPSVITYYLCGLQNGYEHFFYFSSVLFSSLMLVESLMMIVSSIVPNYLMGIVTGAGIQGVMMLVGGFFKLPHDLPNFFWRYPFHYMAFHTYVTEGLFKNEYEGLRFDGPNAQGVNIHMTGEEVLTEIWQIDMSYSKWVDLAIMFGMIVLYRVLFLFIIKGTEKMKPIVGSMLYRMEESSKTVIHVEKPDTTPLNEHVV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04993 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 33 644 - -
Vivi5g04993 667 Pfam ABC-2 type transporter 359 570 IPR013525 GO:0016020|GO:0140359
Vivi5g04993 667 Gene3D - 39 361 IPR027417 -
Vivi5g04993 667 FunFam ABC transporter G family member 11 37 322 - -
Vivi5g04993 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 286 IPR003439 GO:0005524
Vivi5g04993 667 SMART AAA_5 69 263 IPR003593 GO:0016887
Vivi5g04993 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 278 IPR027417 -
Vivi5g04993 667 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Vivi5g04993 667 Pfam ABC-2 type transporter 243 345 IPR043926 GO:0140359
Vivi5g04993 667 Pfam ABC transporter 61 211 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04993 Vivi-Chr5 150498044 150504383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04993 70 268 Calmodulin-binding Proteins AT2G36910 30.000 2.71e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04993 K05681 - gmx:100794527 900.197