Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04970 ATGGGTTTCCTTTTACCTGCTGCTATTAGACGGTCTTCACATCGCAGTATCAAAACATCATCAAAAGTATCAAATGTGCCCAAGGGCTATGTTGCGGTGTACGTCGGAGAGGAAATGAAGCGGTTTGTCGTCCCCATTTCATACTTGAACCAACCTTTATTTCAAAACTTGTTGAATCAAGCAGAGGAAGAATTCGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCAGAGAAGATGTTTTCTTGGATATTACTTCTCAGTTCAATAGCCTATAA 282 0.4113 MGFLLPAAIRRSSHRSIKTSSKVSNVPKGYVAVYVGEEMKRFVVPISYLNQPLFQNLLNQAEEEFGYDHPMGGLTIPCREDVFLDITSQFNSL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04970 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 89 IPR003676 GO:0009733
Vivi5g04970 93 Pfam Auxin responsive protein 15 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04970 Vivi-Chr5 150156992 150157547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04970 25 83 Calmodulin-binding Proteins AT3G43120 55.932 3.54e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04970 K14488 - gmx:100806671 135.191