Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04925 ATGAAGAGAGTGTGTCCATTACAACTAGAAGCAACCCTTTCCTCATTTTCCTTTATGGCTTCACCTTGTAACCCTAAAAGTGAAAATAATGACATAGAATCAAAACCAAACCATGTTGAAGAAAGTGAAGAAAACAACAACATTGATTATTCTCAAAGAGCACAATGGCTAAGAGCAGCTTTACTAGGAGCAAACGATGGTTTGGTATCAATAACATCATTGATGTTAGGTGTTGGAGCAGTGAATGAAGACATCAAAACAATGCTTCTTGCTGGTTTTGCAGGACTAATTGCAGGTGCATGCAGCATGGGAATTGGAGAGTTTGTTTCTGTTTATACTCAACTTGACATAATAGTAGCTCAAATGAAAAGAGAGAACATAATTAGCAACACTATTGATGAAGATGAAAAGCTATTACCAAATCCTTTTCAAGCTGCTATAGCATCAGCAATTGCATTTTCTTTTGGTGCTAGTGTTCCATTGCTAGGAGCAGCATTGGTTAGGGACTATAAAATAAGGTTGGTGGTTGTTGTTGTTATGGCTAGTTTGGCTTTGTTTGTGTTTGGTGGGGTGGGAGCAATGCTTGGTAAAACATCATTGAAATGGTCTTGTTTTAGAGTAGTGGTTGGTGGTTGGATGGCTATGGTTATTACTTTTGGATTCACCAAATTAGTTGGATATAGTTCACTTTGA 693 0.3752 MKRVCPLQLEATLSSFSFMASPCNPKSENNDIESKPNHVEESEENNNIDYSQRAQWLRAALLGANDGLVSITSLMLGVGAVNEDIKTMLLAGFAGLIAGACSMGIGEFVSVYTQLDIIVAQMKRENIISNTIDEDEKLLPNPFQAAIASAIAFSFGASVPLLGAALVRDYKIRLVVVVVMASLALFVFGGVGAMLGKTSLKWSCFRVVVGGWMAMVITFGFTKLVGYSSL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04925 230 MobiDBLite consensus disorder prediction 31 46 - -
Vivi5g04925 230 Pfam VIT family 57 128 IPR008217 GO:0005384|GO:0030026
Vivi5g04925 230 Pfam VIT family 132 222 IPR008217 GO:0005384|GO:0030026
Vivi5g04925 230 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 33 225 IPR008217 GO:0005384|GO:0030026
Vivi5g04925 230 MobiDBLite consensus disorder prediction 24 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04925 Vivi-Chr5 149482231 149483188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04925 26 230 Nodulin-like Gene Family AT3G43660 59.512 9.69e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04925 K22736 - gmx:100817158 247.284